DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a6

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_017949178.2 Gene:slc6a6 / 100494063 XenbaseID:XB-GENE-991256 Length:616 Species:Xenopus tropicalis


Alignment Length:624 Identity:211/624 - (33%)
Similarity:327/624 - (52%) Gaps:102/624 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELG 114
            |..|:|..|:.|:.|.||:.|..:||||:|||||||.:|||||||||:.:.|...|:|:|.:|:.
 Frog    36 GKPPQREKWASKIDFVLSVAGGFIGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGGGLPVFFLEVV 100

  Fly   115 IGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC--- 176
            :||....|.:..|..|.|...|||.:|.::...:.:||.||:.|..:|||.||:..|||:.|   
 Frog   101 LGQFTSEGGITCWEKICPVFTGIGYASIVIVSLLNVYYIVILAWGVYYLFQSFQGQLPWALCHQP 165

  Fly   177 -------------------PLNGTGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLC 222
                               .:|.|.|       :|..|.||....|..:..:|:.|.|||.:.||
 Frog   166 WNTESCVEDTFRKNWTMWMSMNSTNF-------TSPVTEFWEHKVLSLSKGIDDVGVLKWDLALC 223

  Fly   223 LMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEP 287
            |:|:|.|.||.:.||::|:|||||||:.||:|:|.:..|||:||.||..|:.....|.:.:|.:|
 Frog   224 LLLTWVICFFCIWKGVRSTGKVVYFTATFPFIMLLVLLIRGVTLPGAAEGIKFYLYPDITRLADP 288

  Fly   288 TVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKAT 352
            .||:||.||:|:|:.:..|::.:.||||..|.||.||.:|:...|:.|:..:...||::|||.| 
 Frog   289 QVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSFVSGFAIFSVLGFMA- 352

  Fly   353 VNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAF 417
                                   ..||.:.|                       |.|..|.||||
 Frog   353 -----------------------QEQGVDIA-----------------------DVAESGPGLAF 371

  Fly   418 IVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDI---DIIKRVKKQHVTGVVC 479
            |.:.:|:..:|...|||:|||.|||.|||.||...:||.:.:|.|:   .:.|..:::....|||
 Frog   372 IAYPKAVSMMPLPSFWAILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAVVC 436

  Fly   480 LFCFIVGFIFCTGAGEYWLKMFDSFAGT-IGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPG 543
            ...:::|....|..|.|..::||.:|.: :.|:.||..|.:||.::||.::|.::|..|.||:||
 Frog   437 FLSYLLGLTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECVAVAWVYGADKFYDNIEDMIGYKPG 501

  Fly   544 RYWQWTWRYIGPVIMV-CILVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGV 607
            .:.:|:|..|.|::.| |.:.|...:..:   ||..:..         ||:|.:|:...:.|:.:
 Frog   502 PWMKWSWTVITPLLCVACFIFSLAKYTPL---TYNKYYV---------YPDWAIGLGWVLALSSM 554

  Fly   608 LPMPIVFLMRSFQCLKVDLDIHQGS-IRRNETTASTKEM 645
            :.:|:|.:   |..::.|     || |.|.:...:.:|:
 Frog   555 ICIPLVVV---FHIVRSD-----GSLIERIKAVTAPREV 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 202/588 (34%)
slc6a6XP_017949178.2 SLC6sbd_TauT 41..582 CDD:271398 208/614 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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