DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a8

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_002935539.1 Gene:slc6a8 / 100489909 XenbaseID:XB-GENE-986840 Length:644 Species:Xenopus tropicalis


Alignment Length:615 Identity:207/615 - (33%)
Similarity:324/615 - (52%) Gaps:105/615 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 PERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQ 117
            |||..|:.:|.|.:|.:|::|||||:|||||||.:||||.||||::::.||.|||:|.:|:.:||
 Frog    56 PERDTWTSQMDFIMSCVGFAVGLGNVWRFPYLCYKNGGGVFLIPYILIAILGGIPIFFLEIALGQ 120

  Fly   118 RMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTG 182
            .|:.|::.||| |.|...|||.:|.::..|...||.:|:||..:||..||...||||.|  |.|.
 Frog   121 FMKAGSIAVWN-IAPLFQGIGFASVVIVFFCNTYYILILTWGVYYLVKSFSAVLPWSHC--NNTW 182

  Fly   183 --------FELEECA------------------KSSETTYFWYRTTLDAAPSMDEPGGLKWWIVL 221
                    |..|:|.                  |.|..|.||.:..|..:..:|:.|.:.|.::|
 Frog   183 NSPDCVDIFRQEDCTNGTANSTFGNLTCNELADKVSPITEFWEKKVLRLSSGLDDIGSINWELLL 247

  Fly   222 CLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLE 286
            ||:..|.:|:|.|.||::|:||:||||:.|||:||.|..:||..|.||..|:::...|...||..
 Frog   248 CLIGCWLLVYFCVWKGVKSTGKIVYFTATFPYVVLLILLVRGAMLPGATEGIIYYLKPDWSKLGT 312

  Fly   287 PTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKA 351
            ..||:||.||:|:|:.:..|:|.|.||||...|:|.:|..:::|.|:.|:.:|..|:|:||||.|
 Frog   313 AQVWIDAGTQIFFSYAIGLGALTALGSYNRFNNDCYKDAFILAVINSGTSFFAGFVVFSILGFMA 377

  Fly   352 TVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLA 416
            .                            ||      |.::.::             |..|.|||
 Frog   378 N----------------------------EQ------GVDISKV-------------AESGPGLA 395

  Fly   417 FIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIK---RVKKQHVTGVV 478
            ||.:.:|:..:|.||.|:.|||.|||.|||.||...:||::..:.|:...:   |.:::....:.
 Frog   396 FIAYPRAVSLMPVAPLWSALFFFMLLLLGLDSQFVGVEGLITAILDLLPARYYFRFQREIAVAIC 460

  Fly   479 CLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVV--ALMEMIAVIFIYGHERFTEDIFQMTGYR 541
            |...|::.....|..|.|..::||.::.: |:.::  ...:.:.|.::||.:||.:||.:|.|||
 Frog   461 CAIMFLIDLSMLTEGGMYVFQLFDYYSAS-GMTLLWQTFWQCVVVAWVYGADRFMDDIARMIGYR 524

  Fly   542 PGRYWQWTWRYIGPVIMVCILVSSVVFM--VIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMIL 604
            |..:.:|.|.::.|.:.:.|.:.:::..  :..|.:|             :||.|...|.....|
 Frog   525 PFPWMKWCWSFVTPFVCMAIFLFNLINYKPLTYNNSY-------------TYPWWGEAIGWGFAL 576

  Fly   605 AGVLPMPIVFLMRSFQCLKVDLDIHQGSIR 634
            :.:|.:|:.||.: ..|.|       ||:|
 Frog   577 SSMLCVPVTFLYK-ITCAK-------GSLR 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/594 (34%)
slc6a8XP_002935539.1 SLC5-6-like_sbd 58..644 CDD:382020 205/613 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 582 1.000 Domainoid score I212
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 589 1.000 Inparanoid score I978
OMA 1 1.010 - - QHG48419
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1148
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.870

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