DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and slc6a19a.2

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_002665492.2 Gene:slc6a19a.2 / 100334171 ZFINID:ZDB-GENE-141210-16 Length:647 Species:Danio rerio


Alignment Length:635 Identity:279/635 - (43%)
Similarity:417/635 - (65%) Gaps:27/635 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLI 102
            |..:.::.:::. ...||..|..|.|:.|:.:|:.|||||:||||||||.:|||||:|||:::|:
Zfish    17 PSHSELEKLELQ-EAGERPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLV 80

  Fly   103 LEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSF 167
            ||||||..:|..||||:|.|::|||.:|:|:|.|:||:|.:|:..|.:|||.||.||.:|.||||
Zfish    81 LEGIPLLHLEFAIGQRLRRGSVGVWRSINPYLLGVGIASMLVSFIVGMYYNTIIAWVMWYFFNSF 145

  Fly   168 RYPLPWSSCPLNG--TGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIV 230
            :.|||||.||:||  ||| :.||.:||...|||||.||:..|.:::.|||:||:||.|:.:||::
Zfish   146 QDPLPWSQCPINGSRTGF-VSECERSSPVDYFWYRKTLNTTPHIEDSGGLQWWMVLSLLCAWTVL 209

  Fly   231 FFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAAT 295
            :...::||:::||.||.||..||:|||||.|||:||:|:.:|:..::||.|.:||:|..||||..
Zfish   210 WVCCIRGIETTGKAVYITSTLPYLVLTIFLIRGLTLKGSVSGIKFLFTPDVNELLDPQTWLDAGA 274

  Fly   296 QVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVA 360
            |||:||.||||.||||.|||:..|||.:|.:::|:.|.:|:|||::||::|:||:||...|.|:.
Zfish   275 QVFFSFSLAFGGLIAFSSYNSVHNNCEQDAVIISIINGMTSIYAAIVIYSIIGFRATERFDDCLN 339

  Fly   361 SNTEILV------KNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIV 419
            .|...|:      :..::..|.|:..:| :::.....:..|||..|.:...|....|||||||||
Zfish   340 GNILSLLNAFDLPEGSIIEGNYTEAIQQ-LNISRPDIIQELQLKTCDMQTFLSQGVEGTGLAFIV 403

  Fly   420 FTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDII-KRVKKQHVTGVVCLFCF 483
            ||:||.::|.:|.|:||||.||..|||.:..|.:||::..|.|:||: |...|:..|.:||:..|
Zfish   404 FTEAITKMPVSPLWSVLFFIMLFCLGLSTMFGSIEGVVVPLQDLDILPKNWPKEAYTALVCVVSF 468

  Fly   484 IVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQW 548
            ....||..|:|||||.:||.||.:|.|:::|..||:||.::||.:||.:||..|.|::|..:||.
Zfish   469 AFAIIFAQGSGEYWLALFDGFAVSIPLLIIAFCEMMAVSYVYGIDRFNDDIKFMIGHKPNIFWQA 533

  Fly   549 TWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNAD---LGMIEQKSYPNWVMGIALSMILAG--VL 608
            |||.|.|:|::.|.:...|..|.:..||.||:.:   ...:....||.|:.  |:..||||  ||
Zfish   534 TWRLISPLIVLVIFLFYFVTTVSKKLTYIAWDPESENFPTLSVLPYPGWIS--AIIFILAGIPVL 596

  Fly   609 PMPIVFLMRSF--QCLKVDLDIHQGSIRRNETTASTKEMIDNDDDDDEDD 656
            .:|.|.|:|..  :|.|.: :.|     ..||..|..:.:...::.::::
Zfish   597 VIPTVALVRLIRNRCCKKE-ETH-----ATETPYSISDRVQMMEETEQNN 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 270/575 (47%)
slc6a19a.2XP_002665492.2 SLC5-6-like_sbd 33..613 CDD:294310 272/583 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48419
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 1 1.000 - - FOG0001784
OrthoInspector 1 1.000 - - otm25048
orthoMCL 1 0.900 - - OOG6_101967
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.790

Return to query results.
Submit another query.