DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a11b

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_017213744.2 Gene:slc6a11b / 100150472 ZFINID:ZDB-GENE-121116-2 Length:617 Species:Danio rerio


Alignment Length:678 Identity:217/678 - (32%)
Similarity:336/678 - (49%) Gaps:128/678 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQR 118
            ||..|:.|::|.||:.|..:||||:|||||||.:||||||.:|:::..:..|||:|.:|..:||.
Zfish    38 ERGQWNNKVEFVLSVAGEIIGLGNVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQF 102

  Fly   119 MRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTGF 183
            ...|.:..|..:.|...|||.::.::...:.:||.||:.|..|||||.|...|||:||   |..:
Zfish   103 TSEGGITCWRKVCPLFEGIGYATQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWASC---GHYW 164

  Fly   184 ELEECA--------------KSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIV 234
            ..|.|.              .:|....||.|..|..:..::|.|||:|.:.|||.::|.|.:|.:
Zfish   165 NTENCVDFNNESIANFTNPYSTSPVMEFWERRVLKISSGIEEVGGLRWELALCLAIAWVICYFCI 229

  Fly   235 MKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFY 299
            .||.:|:|||||.|:.|||.:|.|..:|||||.||..|:.....|.:.:|.:|.||:||.||:|:
Zfish   230 WKGPKSTGKVVYVTATFPYFMLLILLLRGITLPGAANGIKFYLYPDISRLSDPQVWVDAGTQIFF 294

  Fly   300 SFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTE 364
            |:.:..|.|.|.||||:..|||.||.|::...|:.|:..|...||::|||.|             
Zfish   295 SYAICLGCLTALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMA------------- 346

  Fly   365 ILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPG 429
                           |||.:.:    |.:               |..|.|||||.:.:|:..:|.
Zfish   347 ---------------YEQNVPI----EAV---------------AESGPGLAFIAYPKAVTMMPW 377

  Fly   430 APFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKRV-----KKQHVTGVVCLFCFIVGFIF 489
            ||.||.|||.||:.|||.||...:|.::..:  :|:..:.     :::.:...:.:..|.:|.|.
Zfish   378 APLWAALFFMMLIFLGLDSQFVCVESLVTAI--VDMYPKTFRVGYRRELLILGMSIASFFLGLIM 440

  Fly   490 CTGAGEYWLKMFDSFAGT-IGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYI 553
            .|..|.|..::|||:|.: :.|:.||:.|.|.:.::||.:||..:|..|.||:|..:.:|.|::.
Zfish   441 LTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYLNIEDMIGYKPIFFIKWCWKFF 505

  Fly   554 GPVIMVCILVSSVVFMVIR------NPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPI 612
            .|.|...|.    :|.:|:      |..|             :||:|..||...|.::.::.:|:
Zfish   506 TPGICTGIF----LFFLIKYKPLKYNNVY-------------TYPDWGYGIGWMMAMSSMVCIPL 553

  Fly   613 VFLMRSFQCLKVDLDIHQGSIR---RNETTASTKEMIDNDDDDDEDDENDFSGPALGGHVKTQSD 674
            ..|   ||..|.     :|:.|   :..||.|                   :...:.|||.::..
Zfish   554 GIL---FQIWKT-----KGTFRERIKKLTTPS-------------------ADLRMRGHVASRGP 591

  Fly   675 FSDDDEEDKPMTMRMMMMRPTTTTKTSN 702
            .:.:|.:.|   ||......|.|.|.::
Zfish   592 CAINDADAK---MRADGKISTITEKETH 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 198/587 (34%)
slc6a11bXP_017213744.2 SLC5-6-like_sbd 38..576 CDD:320982 205/614 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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