DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a18

DIOPT Version :10

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001108369.2 Gene:slc6a18 / 100141332 ZFINID:ZDB-GENE-080219-9 Length:618 Species:Danio rerio


Alignment Length:595 Identity:283/595 - (47%)
Similarity:399/595 - (67%) Gaps:25/595 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVM 100
            ||.:.:|||         ||..|..|:|:.|:.:|::||||||||||||||..||||||||:::.
Zfish     3 TASETSSVQ---------ERPKWDNKVQYLLTCVGFAVGLGNIWRFPYLCQIYGGGAFLIPYLIA 58

  Fly   101 LILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFN 165
            |:.||:||..:||.|||.:|.|::|||::|.|.|||:|::|.:|:..|.|:||.|:.||.:|.|:
Zfish    59 LVFEGLPLLYLELAIGQSLRKGSIGVWHSISPLLGGVGVASMVVSFLVGLFYNTILAWVLWYFFH 123

  Fly   166 SFRYPLPWSSCPLNGT--GFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWT 228
            ||..|||||.||:|..  |: :|||..|:...|:|||.||:.:|.:::.|.|:|.:||||..:|:
Zfish   124 SFEDPLPWSQCPINDNLEGY-VEECVSSTPVNYYWYRQTLNISPDIEQSGSLQWTLVLCLATAWS 187

  Fly   229 IVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDA 293
            ||:...::||::.||.||.|:.|||:|||||.:|.:||.||..||.:::||....|..|.|||||
Zfish   188 IVYICFIRGIETIGKAVYVTATFPYLVLTIFLVRALTLPGATDGLQYLFTPDWSLLTNPQVWLDA 252

  Fly   294 ATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRC 358
            |||:|:|..||||.||||.|||..||:|.||.|.|.:.|:.|::|||:.||||||||||.|.:.|
Zfish   253 ATQIFFSLSLAFGGLIAFSSYNPKKNDCERDALFVGIINSATSLYASIPIFAILGFKATSNFNSC 317

  Fly   359 VASNTEILVKNKLLGLND----TQGYEQAMSLLNGTE---LLRLQLSECSLAHELDNAAEGTGLA 416
            |.||  ||.......:.|    .:.|:..:..||.::   :..|.|..|.|.:.||.:|.|||||
Zfish   318 VNSN--ILDLTNAFDIGDRNITIENYDSWLRDLNASDPDRVSSLNLKHCVLKNFLDQSASGTGLA 380

  Fly   417 FIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKR-VKKQHVTGVVCL 480
            |||||:|::|:||:..||||||.||.||||.|..|.|||:|..|.|:.::.| :.|:..||::|:
Zfish   381 FIVFTEAVIEMPGSQVWAVLFFVMLFSLGLSSMFGNLEGVLTPLLDLHMVPRWMPKEIFTGLICV 445

  Fly   481 FCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRY 545
            ..|:|..||..|:|.|||::|:|:.|::.|:|:|..|:|||:..||.:||::||.||||.||..:
Zfish   446 VNFLVALIFTLGSGNYWLEIFNSYVGSVPLLVIAFFEIIAVVCFYGIKRFSDDIEQMTGRRPNLF 510

  Fly   546 WQWTWRYIGPVIMVCILVSSVVFMVIRNPTYGAWN---ADLGMIEQKSYPNWVMGIALSMILAGV 607
            |:..|..|.||:::.:||:.||..|.::|||.|||   .:....|:|.|..||..|.:.:....|
Zfish   511 WRCCWMGISPVMLLVVLVAYVVVQVQKHPTYPAWNPQYENFPETEEKPYSTWVFSICVLLSSVPV 575

  Fly   608 LPMPIVFLMR 617
            :.:|||.|.|
Zfish   576 ISIPIVALYR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 276/574 (48%)
slc6a18NP_001108369.2 None

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