DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30116 and TEX1

DIOPT Version :9

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_014146.1 Gene:TEX1 / 855468 SGDID:S000005197 Length:422 Species:Saccharomyces cerevisiae


Alignment Length:452 Identity:92/452 - (20%)
Similarity:158/452 - (34%) Gaps:129/452 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 SVISLKDRDREKDSLSAVSAVSAGRKSSSTHHNDDTSTFYNPIAADVSYSMRHVEESWHHLMRSD 768
            |.|...|...:|...|.|:|....:...||....:||               |:|:.....:.|.
Yeast     2 STIGAVDILNQKTITSEVAASVTSKYLQSTFSKGNTS---------------HIEDKRFIHVSSR 51

  Fly   769 DTTRFKQIAVCNFDFLLAA--VQTVSISYLR----CLIEHVRCYILDRDIELIYYTIRKSSDVLT 827
            ..:||....:...:.|...  |...|::|.|    ..:..::....|:.:| :|......||.|.
Yeast    52 SHSRFTSTPITPNEILSLKFHVSGSSMAYSRMDGSLTVWFIKDASFDKSVE-VYIPDCCGSDKLA 115

  Fly   828 RDPMQLGSQLISWLRPISEH------DDDDNSLLSMTVRSATAWCDGYAVPLLVPLTGWLPAPLP 886
            .|        :|| .|.|.:      :..:.|||.:..:|.||                      
Yeast   116 TD--------LSW-NPTSLNQIAVVSNSSEISLLLINEKSLTA---------------------- 149

  Fly   887 SQIRTMTVSGTGCIRAVWLAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVA--P 949
            |::||:::.....:......|....|:.||.|   ::.::.....||      ::|..|.::  .
Yeast   150 SKLRTLSLGSKTKVNTCLYDPLGNWLLAATKS---EKIYLFDVKKDH------SSVCSLNISDIS 205

  Fly   950 QSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLA 1014
            |.|::::.:       |.|..|    .:||       ..|..:|.                  ||
Yeast   206 QEDNDVVYS-------LAWSNG----GSHI-------FIGFKSGY------------------LA 234

  Fly  1015 SGKLRH-------RITHHRGPVSGIVVAGACDVLISGGLDRTICVWDLDNF---TLLNTMQMTSA 1069
            ..|.:|       :|..|.||::.|.:.......|:|.:|....||::.:.   .::|  .:.||
Yeast   235 ILKAKHGILEVCTKIKAHTGPITEIKMDPWGRNFITGSIDGNCYVWNMKSLCCELIIN--DLNSA 297

  Fly  1070 VLRIDISWNSVFLLALCEDNALYVRTLATGKELHT-----------LKGHKSKIRSISIGKD 1120
            |..:|:......|....||..:|...|.:|..||:           ||.:..|...|..||:
Yeast   298 VTTLDVCHLGKILGICTEDEMVYFYDLNSGNLLHSKSLANYKTDPVLKFYPDKSWYIMSGKN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 AAA_16 359..505 CDD:289934
WD40 repeat 901..937 CDD:293791 7/35 (20%)
WD40 933..1282 CDD:238121 45/211 (21%)
WD40 repeat 942..982 CDD:293791 9/41 (22%)
WD40 repeat 988..1024 CDD:293791 7/42 (17%)
WD40 1022..1484 CDD:225201 29/113 (26%)
WD40 repeat 1029..1064 CDD:293791 7/37 (19%)
WD40 repeat 1071..1106 CDD:293791 9/45 (20%)
WD40 repeat 1112..1147 CDD:293791 3/9 (33%)
WD40 repeat 1216..1252 CDD:293791
WD40 1248..1502 CDD:238121
WD40 repeat 1258..1294 CDD:293791
WD40 repeat 1299..1335 CDD:293791
WD40 repeat 1340..1374 CDD:293791
WD40 repeat 1379..1415 CDD:293791
WD40 repeat 1421..1458 CDD:293791
WD40 repeat 1464..1488 CDD:293791
TEX1NP_014146.1 WD40 1..>374 CDD:225201 92/452 (20%)
WD40 repeat 66..109 CDD:293791 8/43 (19%)
WD40 repeat 116..158 CDD:293791 14/72 (19%)
WD40 repeat 163..205 CDD:293791 9/50 (18%)
WD40 repeat 213..249 CDD:293791 11/71 (15%)
WD40 repeat 256..290 CDD:293791 6/33 (18%)
WD40 repeat 298..336 CDD:293791 10/37 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.