DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and TEX1

DIOPT Version :10

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_014146.1 Gene:TEX1 / 855468 SGDID:S000005197 Length:422 Species:Saccharomyces cerevisiae


Alignment Length:452 Identity:92/452 - (20%)
Similarity:158/452 - (34%) Gaps:129/452 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 SVISLKDRDREKDSLSAVSAVSAGRKSSSTHHNDDTSTFYNPIAADVSYSMRHVEESWHHLMRSD 768
            |.|...|...:|...|.|:|....:...||....:||               |:|:.....:.|.
Yeast     2 STIGAVDILNQKTITSEVAASVTSKYLQSTFSKGNTS---------------HIEDKRFIHVSSR 51

  Fly   769 DTTRFKQIAVCNFDFLLAA--VQTVSISYLR----CLIEHVRCYILDRDIELIYYTIRKSSDVLT 827
            ..:||....:...:.|...  |...|::|.|    ..:..::....|:.:| :|......||.|.
Yeast    52 SHSRFTSTPITPNEILSLKFHVSGSSMAYSRMDGSLTVWFIKDASFDKSVE-VYIPDCCGSDKLA 115

  Fly   828 RDPMQLGSQLISWLRPISEH------DDDDNSLLSMTVRSATAWCDGYAVPLLVPLTGWLPAPLP 886
            .|        :|| .|.|.:      :..:.|||.:..:|.||                      
Yeast   116 TD--------LSW-NPTSLNQIAVVSNSSEISLLLINEKSLTA---------------------- 149

  Fly   887 SQIRTMTVSGTGCIRAVWLAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVA--P 949
            |::||:::.....:......|....|:.||.|   ::.::.....||      ::|..|.::  .
Yeast   150 SKLRTLSLGSKTKVNTCLYDPLGNWLLAATKS---EKIYLFDVKKDH------SSVCSLNISDIS 205

  Fly   950 QSDSELLLTGSEDATVLVWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLA 1014
            |.|::::.:       |.|..|    .:||       ..|..:|.                  ||
Yeast   206 QEDNDVVYS-------LAWSNG----GSHI-------FIGFKSGY------------------LA 234

  Fly  1015 SGKLRH-------RITHHRGPVSGIVVAGACDVLISGGLDRTICVWDLDNF---TLLNTMQMTSA 1069
            ..|.:|       :|..|.||::.|.:.......|:|.:|....||::.:.   .::|  .:.||
Yeast   235 ILKAKHGILEVCTKIKAHTGPITEIKMDPWGRNFITGSIDGNCYVWNMKSLCCELIIN--DLNSA 297

  Fly  1070 VLRIDISWNSVFLLALCEDNALYVRTLATGKELHT-----------LKGHKSKIRSISIGKD 1120
            |..:|:......|....||..:|...|.:|..||:           ||.:..|...|..||:
Yeast   298 VTTLDVCHLGKILGICTEDEMVYFYDLNSGNLLHSKSLANYKTDPVLKFYPDKSWYIMSGKN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 WD40 <897..1057 CDD:441893 32/168 (19%)
WD40 repeat 901..937 CDD:293791 7/35 (20%)
WD40 repeat 942..982 CDD:293791 9/41 (22%)
WD40 repeat 988..1024 CDD:293791 7/42 (17%)
WD40 991..1491 CDD:441893 34/151 (23%)
WD40 repeat 1029..1064 CDD:293791 7/37 (19%)
WD40 repeat 1071..1106 CDD:293791 9/45 (20%)
WD40 repeat 1112..1147 CDD:293791 3/9 (33%)
WD40 repeat 1216..1252 CDD:293791
WD40 repeat 1258..1294 CDD:293791
WD40 repeat 1299..1335 CDD:293791
WD40 repeat 1340..1374 CDD:293791
WD40 repeat 1379..1415 CDD:293791
WD40 repeat 1421..1458 CDD:293791
WD40 repeat 1464..1488 CDD:293791
TEX1NP_014146.1 WD40 <63..331 CDD:441893 68/346 (20%)
WD40 repeat 66..109 CDD:293791 8/43 (19%)
WD40 repeat 116..158 CDD:293791 14/72 (19%)
WD40 repeat 163..205 CDD:293791 9/50 (18%)
WD40 repeat 213..249 CDD:293791 11/71 (15%)
WD40 repeat 256..290 CDD:293791 6/33 (18%)
WD40 repeat 298..336 CDD:293791 10/37 (27%)
Blue background indicates that the domain is not in the aligned region.

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