| Sequence 1: | NP_725799.1 | Gene: | CG30116 / 37126 | FlyBaseID: | FBgn0028496 | Length: | 1922 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_010313.3 | Gene: | RAD28 / 851594 | SGDID: | S000002437 | Length: | 506 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 422 | Identity: | 86/422 - (20%) |
|---|---|---|---|
| Similarity: | 147/422 - (34%) | Gaps: | 146/422 - (34%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1256 GVSCLKFAPNGEFLATGSEDRLVHIWNL-------------ALGEICNSFK--GHTAPVVKVVVL 1305
Fly 1306 -MDSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYK----SLSVTNNMRFAVSTNGDNTLKI-WSL 1364
Fly 1365 TQEDEKYSVSHSD-EITCFE-ISADSVHIISGSRDMSLKVWQAT----------GGKLSQV---- 1413
Fly 1414 -------LVGHSD-------------AVTCVAVSVTNKTQVLS-----------------GSKDM 1441
Fly 1442 NLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDK-------------------TLIV 1487
Fly 1488 WETKRGLALTSLQMHVPFTHFDISLEVSRVLVQLVDSYNLPVICLHNTPAQYVKLPTYSGPSKDV 1552
Fly 1553 EDL-RPQGPKRQMKRLLKKEVSLDTYTWQKKY 1583 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG30116 | NP_725799.1 | AAA_16 | 359..505 | CDD:289934 | |
| WD40 repeat | 901..937 | CDD:293791 | |||
| WD40 | 933..1282 | CDD:238121 | 9/25 (36%) | ||
| WD40 repeat | 942..982 | CDD:293791 | |||
| WD40 repeat | 988..1024 | CDD:293791 | |||
| WD40 | 1022..1484 | CDD:225201 | 60/320 (19%) | ||
| WD40 repeat | 1029..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1106 | CDD:293791 | |||
| WD40 repeat | 1112..1147 | CDD:293791 | |||
| WD40 repeat | 1216..1252 | CDD:293791 | |||
| WD40 | 1248..1502 | CDD:238121 | 66/338 (20%) | ||
| WD40 repeat | 1258..1294 | CDD:293791 | 11/50 (22%) | ||
| WD40 repeat | 1299..1335 | CDD:293791 | 9/36 (25%) | ||
| WD40 repeat | 1340..1374 | CDD:293791 | 7/34 (21%) | ||
| WD40 repeat | 1379..1415 | CDD:293791 | 12/57 (21%) | ||
| WD40 repeat | 1421..1458 | CDD:293791 | 11/53 (21%) | ||
| WD40 repeat | 1464..1488 | CDD:293791 | 3/42 (7%) | ||
| RAD28 | NP_010313.3 | WD40 | 1..386 | CDD:225201 | 69/351 (20%) |
| WD40 repeat | 61..102 | CDD:293791 | 9/40 (23%) | ||
| WD40 repeat | 108..170 | CDD:293791 | 14/67 (21%) | ||
| WD40 repeat | 198..233 | CDD:293791 | 9/34 (26%) | ||
| WD40 repeat | 241..279 | CDD:293791 | 6/39 (15%) | ||
| WD40 repeat | 290..351 | CDD:293791 | 7/69 (10%) | ||
| WD40 repeat | 362..388 | CDD:293791 | 10/33 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||