DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and AT2G26490

DIOPT Version :10

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_180217.1 Gene:AT2G26490 / 817190 AraportID:AT2G26490 Length:465 Species:Arabidopsis thaliana


Alignment Length:527 Identity:107/527 - (20%)
Similarity:176/527 - (33%) Gaps:168/527 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1193 PRRKRSLKRHAQAQRSPSTTLPPITCFDLSRDSQQMAIASGRHVHLM-----RINTPEYQCT--- 1249
            ||.|.:...|:....|.:.|......:.: |:|...|:.:|.:..:.     .:.:|..|.|   
plant     9 PRAKYANMMHSDPNLSSTMTQQTEEEYGI-RNSSASAVGTGMYDRMSCEGSPMMMSPWNQATPFT 72

  Fly  1250 ----------------------LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEI---- 1288
                                  .|||...::..|     :.|.|||:.:.:.:|. .|.|.    
plant    73 QTQWSTVEENLPQNGLIGSLVREEGHIYSLAATK-----DLLYTGSDSKNIRVWK-NLKEFSAFK 131

  Fly  1289 CNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGN--------LLQTIQGPYKS----- 1340
            |||      .:||.:|:... ::.:..:|..:.||.....|        .|.|::..:|:     
plant   132 CNS------GLVKAIVISGE-KIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPR 189

  Fly  1341 ----------------------LSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSHSDEITCFE 1383
                                  ||:.:......|.:.|.|:|:|.:.......|:...|:.....
plant   190 NYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV 254

  Fly  1384 ISADSVHIISGSRDMSLKVWQA------TGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMN 1442
            :|.....:.|||.|.::|.|:.      |...|.|.|.....|||.:||| .|...|..||.|..
plant   255 VSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVS-KNGAAVYFGSSDGL 318

  Fly  1443 LILWD----LLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWETKRGLALTSLQMHV 1503
            :..|:    |..|   ..|.||...|:.::|:  ||...|||.|||:.||:....:         
plant   319 VNFWEREKQLNYG---GILKGHKLAVLCLEVA--GSLVFSGSADKTICVWKRDGNI--------- 369

  Fly  1504 PFTHFDISLEVSRVLVQLVDSYNLPVICLHNTPAQYVKLPTYSGPSKDVEDLRPQGPKRQMKRLL 1568
                        ...:.::..:..||.||                  .||..|....:|..|   
plant   370 ------------HTCLSVLTGHTGPVKCL------------------AVEADREASERRDKK--- 401

  Fly  1569 KKEVSLDTYTWQKKYGHLTSSVMMAQVDERLKRRFSVSASMEEISKIAETKTGASQANLGPEQAA 1633
                      |....|.|..||.:..|.|..       ..|.::|.:.:.:          :|..
plant   402 ----------WIVYSGSLDKSVKVWGVSESF-------IDMNQMSMMQQQQ----------QQHV 439

  Fly  1634 LAQSQHF 1640
            ::.|:.|
plant   440 ISHSEPF 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 WD40 <897..1057 CDD:441893
WD40 repeat 901..937 CDD:293791
WD40 repeat 942..982 CDD:293791
WD40 repeat 988..1024 CDD:293791
WD40 991..1491 CDD:441893 86/376 (23%)
WD40 repeat 1029..1064 CDD:293791
WD40 repeat 1071..1106 CDD:293791
WD40 repeat 1112..1147 CDD:293791
WD40 repeat 1216..1252 CDD:293791 7/65 (11%)
WD40 repeat 1258..1294 CDD:293791 11/39 (28%)
WD40 repeat 1299..1335 CDD:293791 9/43 (21%)
WD40 repeat 1340..1374 CDD:293791 8/60 (13%)
WD40 repeat 1379..1415 CDD:293791 10/41 (24%)
WD40 repeat 1421..1458 CDD:293791 13/40 (33%)
WD40 repeat 1464..1488 CDD:293791 10/23 (43%)
AT2G26490NP_180217.1 WD40 96..416 CDD:238121 87/390 (22%)
WD40 repeat 137..171 CDD:293791 7/34 (21%)
WD40 repeat 210..245 CDD:293791 8/34 (24%)
WD40 repeat 251..288 CDD:293791 8/36 (22%)
WD40 repeat 298..335 CDD:293791 13/40 (33%)
WD40 repeat 341..363 CDD:293791 10/23 (43%)
WD40 repeat 383..416 CDD:293791 13/63 (21%)
Blue background indicates that the domain is not in the aligned region.

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