Sequence 1: | NP_725799.1 | Gene: | CG30116 / 37126 | FlyBaseID: | FBgn0028496 | Length: | 1922 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_076469.1 | Gene: | Apaf1 / 78963 | RGDID: | 620575 | Length: | 1249 | Species: | Rattus norvegicus |
Alignment Length: | 1481 | Identity: | 279/1481 - (18%) |
---|---|---|---|
Similarity: | 488/1481 - (32%) | Gaps: | 481/1481 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 212 LLRRTQIEREVSQAMA---LTSEKILAVFRERAAQCSKGDVEAAERLRKIKDELTMNLSTDNHTT 273
Fly 274 LVVPGSAASEAIDPDNEDHESY-------------LSKFKNKVTD------KLRLLIEAHITNDP 319
Fly 320 DVIKGRKKTVQEIFH---------------------EHATHLRILREHTDSDALVES-------- 355
Fly 356 -RVPQQLRQNLMANFRNGSRHAPYFLCGADGSGKSAILCHLYGQVGSWFGSTRVHRVIRFAK--- 416
Fly 417 ------ATPRSAYNLE------LLRVICQQISIIFNIPEGYLPKDASFDPLYINTWFQNLLRRVE 469
Fly 470 DMGNDVLFLFI----DDL----HLL------NPLDCDIVTALSWLPTSLP--WNVQIICSSTTPV 518
Fly 519 EQLKFTPMQRDRFKSIEYQFDLNMGDYATKLKIPPQCIPGDVSFALYVEQQFDQLERHYGRQAVG 583
Fly 584 DLA---------SYITCSEYGLSETELLELLMPTDDPESLIETKNGHFSFATFKKIHREMDLLLL 639
Fly 640 LHDKIMSGKVLIQWRHNYCASVAKRRYMDVQRTRSLHCELANLFFPQDEDESTLENESNRSESKS 704
Fly 705 VISLKDRDREKDSLSAVSAVSAGRKSSSTH----HNDDTSTFYNPIAADVSYSMRHVEESWHHLM 765
Fly 766 RSDDTTRFKQIAVC----NFDFLLAAVQTVSISYL-------RCLIEHVRCYILDRDIELIYYTI 819
Fly 820 RKSSDVLTRDP----MQLG------SQLISWLRPISEHDDDDNSLLSMTVRSATAWCDGYAVPLL 874
Fly 875 VPLTGWLPAPLPSQIRTMT--------------VSGTGCIRA--VWLAPSKQHLI---------- 913
Fly 914 ----------LATSSGD--VQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVL 966
Fly 967 VWHVGLRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLASGKLRHRITHHR----- 1026
Fly 1027 -GPVSGIVVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSAVLRIDISWNSVFLLALCEDNA 1090
Fly 1091 LYVRTLATGKELHTLKGHKSKIR--------SISIGKDSQRCV-VGCDDTRALIYDMHAGKLVRS 1146
Fly 1147 LPPNPGPVTAVHAM----DNDDFLVTVGGNKITFYSFR----NEELYVNPYSRHPRRKRSLKRHA 1203
Fly 1204 QAQRSPSTTLPPITCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEF 1268
Fly 1269 LATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLV--WMAHSGNLL 1331
Fly 1332 QTIQGPYKSLSVTNNMRFAVSTNGDNTLKIWS-LTQEDEKYSVSHSDEITCFEISADSVHIISGS 1395
Fly 1396 RDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMN--LILWDLLTGEEVHTLA 1458
Fly 1459 GHLGPVIGVKVSADGSTAVSG--------SDDKTLIV--------WETKRG 1493 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG30116 | NP_725799.1 | AAA_16 | 359..505 | CDD:289934 | 35/174 (20%) |
WD40 repeat | 901..937 | CDD:293791 | 11/59 (19%) | ||
WD40 | 933..1282 | CDD:238121 | 78/371 (21%) | ||
WD40 repeat | 942..982 | CDD:293791 | 12/39 (31%) | ||
WD40 repeat | 988..1024 | CDD:293791 | 8/35 (23%) | ||
WD40 | 1022..1484 | CDD:225201 | 108/497 (22%) | ||
WD40 repeat | 1029..1064 | CDD:293791 | 5/34 (15%) | ||
WD40 repeat | 1071..1106 | CDD:293791 | 6/34 (18%) | ||
WD40 repeat | 1112..1147 | CDD:293791 | 8/43 (19%) | ||
WD40 repeat | 1216..1252 | CDD:293791 | 9/35 (26%) | ||
WD40 | 1248..1502 | CDD:238121 | 65/267 (24%) | ||
WD40 repeat | 1258..1294 | CDD:293791 | 10/35 (29%) | ||
WD40 repeat | 1299..1335 | CDD:293791 | 10/37 (27%) | ||
WD40 repeat | 1340..1374 | CDD:293791 | 8/34 (24%) | ||
WD40 repeat | 1379..1415 | CDD:293791 | 8/35 (23%) | ||
WD40 repeat | 1421..1458 | CDD:293791 | 10/38 (26%) | ||
WD40 repeat | 1464..1488 | CDD:293791 | 7/39 (18%) | ||
Apaf1 | NP_076469.1 | CARD_APAF1 | 7..92 | CDD:260034 | 16/97 (16%) |
AAA_16 | 126..245 | CDD:289934 | 27/144 (19%) | ||
NB-ARC | 129..414 | CDD:279299 | 63/348 (18%) | ||
WD40 | <598..685 | CDD:225201 | 13/96 (14%) | ||
WD40 | 607..910 | CDD:238121 | 70/359 (19%) | ||
WD 1-1 | 613..652 | 5/38 (13%) | |||
WD40 repeat | 623..655 | CDD:293791 | 4/31 (13%) | ||
WD40 | 653..1038 | CDD:225201 | 97/460 (21%) | ||
WD 1-2 | 655..694 | 7/38 (18%) | |||
WD40 repeat | 661..697 | CDD:293791 | 8/35 (23%) | ||
WD 1-3 | 697..738 | 13/41 (32%) | |||
WD40 repeat | 702..740 | CDD:293791 | 12/38 (32%) | ||
WD 1-4 | 741..780 | 9/38 (24%) | |||
WD40 repeat | 747..789 | CDD:293791 | 9/41 (22%) | ||
WD 1-5 | 796..837 | 10/72 (14%) | |||
WD40 repeat | 801..837 | CDD:293791 | 9/67 (13%) | ||
WD 1-6 | 838..877 | 10/38 (26%) | |||
WD40 repeat | 843..882 | CDD:293791 | 9/50 (18%) | ||
WD 1-7 | 880..910 | 7/29 (24%) | |||
WD40 repeat | 885..909 | CDD:293791 | 6/23 (26%) | ||
Interpropeller linker. /evidence=ECO:0000250 | 910..921 | 2/10 (20%) | |||
WD 2-1 | 922..958 | 7/37 (19%) | |||
WD 2-2 | 959..998 | 14/52 (27%) | |||
WD40 | 961..1235 | CDD:238121 | 67/270 (25%) | ||
WD40 | 961..>1235 | CDD:225201 | 67/270 (25%) | ||
WD40 repeat | 964..1001 | CDD:293791 | 11/36 (31%) | ||
WD 2-3 | 1001..1040 | 10/38 (26%) | |||
WD40 repeat | 1006..1030 | CDD:293791 | 6/23 (26%) | ||
WD 2-4 | 1042..1080 | 10/38 (26%) | |||
WD40 repeat | 1048..1082 | CDD:293791 | 9/34 (26%) | ||
WD 2-5 | 1083..1122 | 9/38 (24%) | |||
WD40 repeat | 1089..1124 | CDD:293791 | 8/34 (24%) | ||
WD 2-6 | 1125..1164 | 11/41 (27%) | |||
WD40 repeat | 1130..1174 | CDD:293791 | 12/55 (22%) | ||
WD 2-7 | 1176..1213 | 6/33 (18%) | |||
WD40 repeat | 1181..1203 | CDD:293791 | 3/21 (14%) | ||
WD 2-8 | 1214..1249 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |