DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30116 and Wdr27

DIOPT Version :9

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:XP_006524988.1 Gene:Wdr27 / 71682 MGIID:1918932 Length:851 Species:Mus musculus


Alignment Length:831 Identity:160/831 - (19%)
Similarity:260/831 - (31%) Gaps:283/831 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   905 LAPSKQHLILATSSGDVQQWHIMSNSLDH---IFKGHTAAVTCLLVAPQSDSELLLTGSEDATVL 966
            ||.|.||.........:..|  .|....|   ..:||...:|.::...|.|..||.:.||| .::
Mouse    35 LACSTQHCAFPLDGSRLCVW--SSKDPSHQLLTLQGHHQLITAVVFGNQIDPLLLCSASED-YII 96

  Fly   967 VWHVG-LRER-------RAHIKNAHTAPI---------TGVAAGANNTLIISSSEDASIAITDLA 1014
            :|:|. .||:       |..|..:....:         ..:|..|.|.:.:...|..|:.:    
Mouse    97 MWNVAECREKTLKGLTPRGTILGSLLQTVLCLRFSLDDRAIAVCAGNKISVMDVEKQSVLV---- 157

  Fly  1015 SGKLRHRITHHRGPVSGI-VVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTSA--VLRIDIS 1076
                  .:..|:|.|:.: ........|||...||:..|||....:|:.:..:.:|  :|.:.|:
Mouse   158 ------ELKGHQGSVTAVEFCPWQAHTLISVSEDRSFKVWDFCVGSLIYSSSILTAYPLLNLLIN 216

  Fly  1077 WNSVFLLALCEDNALYVRTLATGKELH------------TLKGHKSKIRSISIGKDSQ-RC---- 1124
            ..:..|:....|..|::.:|..|...|            |....:......|:.:|.| ||    
Mouse   217 EENQQLVTGSADGQLWIFSLMEGHHYHCVAHVDVRKKRETFTTRRMMAEQCSLPEDHQCRCRHEA 281

  Fly  1125 --------------VVGCD-----------------------DTRALIYDMHAGKLVRSLPPNPG 1152
                          :..||                       .|...|.::.:.:|         
Mouse   282 DKRGEAEATFPILSLAPCDLCLPDSQRGAFASECTKCLWIGSSTALFILNLASFEL--------- 337

  Fly  1153 PVTAVHAMDNDDFLVTVGGN---------------------------KITFYSFRNEELY----- 1185
             ..|:|..:.....|.|.|:                           :|...:..:.:.|     
Mouse   338 -EAALHFKEFQSLSVQVAGSCAMVSEPMSAKAFCMLSSMFGSKIAVLEIDLAALLSTQQYPRAGK 401

  Fly  1186 ---------VNPYS---------RHPR-------------RKRSLKRHAQAQRSPSTTLPPITCF 1219
                     |.|.|         :.|:             ..|.|..|.:.:.|..|..|.:..|
Mouse   402 VLSVLASSCVLPTSPLYFGIIKEKFPKLANTKQHAVKSVVEDRPLVFHTKVRSSGYTLAPHMAMF 466

  Fly  1220 DLSRDSQQMAIASGRHVHLMRINTPEYQCTLEG--------------HTAGVSCLKFAPNGEFLA 1270
            ....:.:.....|.::    :.|....:|:||.              ....||||:|:.:|:.||
Mouse   467 SPKTNIKHHNKRSSKY----KNNYKCKECSLENFLPRNLSRQVAVAQKPVAVSCLQFSGDGQKLA 527

  Fly  1271 TGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTI- 1334
            .|..:.|..::|.:|.....:|.||...|..:....|...::||.||..|.||..|...|:..: 
Mouse   528 CGLGNHLSLVFNASLSGPPAAFSGHDGAVSTICWSHDKRWLLSTGRDRTLRVWSVHRTELMLLLA 592

  Fly  1335 -----------------------QGP------------------------YKSLSVTNNMRFAVS 1352
                                   .||                        ||.:     .|..::
Mouse   593 PDAFPKPVTSAQFYYMDTFILLSSGPEFCLLKYHIDLCRDDIRRYKPKSRYKPI-----FRLPMT 652

  Fly  1353 TNGDNTLKIWSLTQEDEKYSVSHSDEITCFEISADSVHII-SGSRDMSLKVWQATGGKLSQVLVG 1416
            :..|    |.||:..::.||                 ||: :..||.:::|:....|..:.||..
Mouse   653 SGAD----ITSLSAVNDFYS-----------------HIVLTAGRDRAVEVFDLNAGCSAAVLAE 696

  Fly  1417 -HSDAVTCVAVSVTNK--TQVLSGSKDMNLI----------LWDLLTGEEVHTLAGHLGP----V 1464
             ||..|..:.   .||  :.|...|...||.          ||||.....|....||  |    .
Mouse   697 VHSRPVHRIC---QNKGSSFVAQHSLAYNLFLTAAVGDGIRLWDLRNLRCVRCFEGH--PNRSYP 756

  Fly  1465 IGVKVSADGSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISLEVS 1515
            .||..|..|.....|::|:...|:|..     :|..:|....|.|...||:
Mouse   757 CGVAFSPCGRLMACGAEDRHAYVYEMG-----SSSFLHRLAGHTDTITEVA 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 AAA_16 359..505 CDD:289934
WD40 repeat 901..937 CDD:293791 8/34 (24%)
WD40 933..1282 CDD:238121 87/502 (17%)
WD40 repeat 942..982 CDD:293791 14/47 (30%)
WD40 repeat 988..1024 CDD:293791 5/35 (14%)
WD40 1022..1484 CDD:225201 123/661 (19%)
WD40 repeat 1029..1064 CDD:293791 10/35 (29%)
WD40 repeat 1071..1106 CDD:293791 9/46 (20%)
WD40 repeat 1112..1147 CDD:293791 10/76 (13%)
WD40 repeat 1216..1252 CDD:293791 5/35 (14%)
WD40 1248..1502 CDD:238121 74/333 (22%)
WD40 repeat 1258..1294 CDD:293791 12/35 (34%)
WD40 repeat 1299..1335 CDD:293791 11/59 (19%)
WD40 repeat 1340..1374 CDD:293791 7/33 (21%)
WD40 repeat 1379..1415 CDD:293791 7/36 (19%)
WD40 repeat 1421..1458 CDD:293791 12/48 (25%)
WD40 repeat 1464..1488 CDD:293791 6/23 (26%)
Wdr27XP_006524988.1 WD40 <47..235 CDD:392136 42/200 (21%)
WD40 repeat 73..118 CDD:293791 13/45 (29%)
WD40 repeat 126..160 CDD:293791 5/43 (12%)
WD40 repeat 166..199 CDD:293791 9/32 (28%)
WD40 repeat 210..236 CDD:293791 5/25 (20%)
WD40 514..813 CDD:392136 76/325 (23%)
WD40 repeat 514..551 CDD:293791 13/36 (36%)
WD40 repeat 557..639 CDD:293791 12/81 (15%)
WD40 repeat 657..695 CDD:293791 12/54 (22%)
WD40 repeat 703..748 CDD:293791 11/47 (23%)
WD40 repeat 756..792 CDD:293791 10/40 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7467
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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