DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and CG1523

DIOPT Version :9

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster


Alignment Length:491 Identity:100/491 - (20%)
Similarity:170/491 - (34%) Gaps:139/491 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1349 FAVSTNGDNTL--KIWSLTQEDEKY-------SVSHSDEITCFEISADSVHIISGSRDMSLKVWQ 1404
            |.:..:.||:|  :|:|.......|       ....:..|...|.:||...:::.:....:.|:.
  Fly    12 FHIHRSDDNSLMRRIYSSMNMFNSYHANCWPTDAGRTGAIFNLEFNADGNVVVAATERKCVLVFD 76

  Fly  1405 A-TGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSKDMNLILWDLLT-GEEVHTLAGHLGPVIGV 1467
            | |..::.:|...|:|:|.|  :...::....:||.|..:.||||.. .:::..|.||...|..:
  Fly    77 AITQKEIFKVPDAHTDSVNC--IKFFDERLFATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNI 139

  Fly  1468 KVSADGSTAVSGSDDKTLIVW----ETKRGL-------ALTSLQMHVPFTHFDISLEVSRVLVQL 1521
            :.|:.....||...|.::..|    :|::||       |...::..:..|...:.|..|...:.:
  Fly   140 EYSSKDKLLVSSGFDGSIFTWDINSQTEQGLISQRVFHASGLMRCRISPTGDKLVLCTSGGYIMI 204

  Fly  1522 VDSYNLPVICLHNTPAQYVKLPTYSGPSKDVEDLRPQGPKRQM------------------KRLL 1568
            :  ::|.:..||                ||:...|| |..|.|                  ||..
  Fly   205 I--HHLDLTTLH----------------KDLCGFRP-GIYRLMQLGEQYIPQAAKYDHVFSKRQK 250

  Fly  1569 KKEVSLDTYTWQKKYGHLTSSVMMAQVDERLKRRFSVSASMEEISKIAETKTGASQANLGPEQAA 1633
            |..|.|.|...:.....:   :|..|:........:.:.|.:|.|:    .|.....|..|.::.
  Fly   251 KNRVELVTDFPENNDAEM---IMALQIHPHCCCMLTRNVSCDEQSE----WTCIHDINEEPVRSE 308

  Fly  1634 LAQSQHFDQLEALWNKRSPPRRRHNAGLSRQTSLVEDR---------------LESSDDDEYQDE 1683
            ..|    |::|.     .|.|:|.:..|:.::||.|.:               |..|....:|.:
  Fly   309 DEQ----DEVEP-----QPKRKRVSTTLASRSSLNESQDQDTVGLTPRQARRPLRVSSVQVFQLD 364

  Fly  1684 RAGMLSASYDNIHHLARLPGLRSLHDAWK------------------------------------ 1712
            .:|....:.||...|.|....  :.|.|.                                    
  Fly   365 NSGAGRGASDNPSVLTRSDSF--IPDIWAAEVTVQERAIRQNRARVSNNHVSGYNFVYAISSGVL 427

  Fly  1713 ------TNSLRVPSRSARTKFYVSTPPPQNSQNSSS 1742
                  .|||...|.|.|.   ::||||..|..|||
  Fly   428 PLRQLGANSLMGSSTSPRP---LTTPPPTESNQSSS 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 AAA_16 359..505 CDD:289934
WD40 repeat 901..937 CDD:293791
WD40 933..1282 CDD:238121
WD40 repeat 942..982 CDD:293791
WD40 repeat 988..1024 CDD:293791
WD40 1022..1484 CDD:225201 34/145 (23%)
WD40 repeat 1029..1064 CDD:293791
WD40 repeat 1071..1106 CDD:293791
WD40 repeat 1112..1147 CDD:293791
WD40 repeat 1216..1252 CDD:293791
WD40 1248..1502 CDD:238121 39/174 (22%)
WD40 repeat 1258..1294 CDD:293791
WD40 repeat 1299..1335 CDD:293791
WD40 repeat 1340..1374 CDD:293791 7/33 (21%)
WD40 repeat 1379..1415 CDD:293791 8/36 (22%)
WD40 repeat 1421..1458 CDD:293791 9/37 (24%)
WD40 repeat 1464..1488 CDD:293791 5/23 (22%)
CG1523NP_651635.2 WD40 43..235 CDD:295369 45/212 (21%)
WD40 <45..>218 CDD:225201 40/192 (21%)
WD40 repeat 51..87 CDD:293791 7/35 (20%)
WD40 repeat 95..129 CDD:293791 8/35 (23%)
WD40 repeat 136..174 CDD:293791 9/37 (24%)
WD40 repeat 181..210 CDD:293791 4/30 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4155
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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