| Sequence 1: | NP_725799.1 | Gene: | CG30116 / 37126 | FlyBaseID: | FBgn0028496 | Length: | 1922 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001014201.1 | Gene: | Wdsub1 / 362137 | RGDID: | 1359296 | Length: | 476 | Species: | Rattus norvegicus |
| Alignment Length: | 473 | Identity: | 103/473 - (21%) |
|---|---|---|---|
| Similarity: | 172/473 - (36%) | Gaps: | 145/473 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHT---------APVVKVVVL 1305
Fly 1306 MDSLRVISTDRDSMLLVWMAHSGNLLQTIQGPYKSLSVTNNMRFAVSTNGDNTLKI-----WSLT 1365
Fly 1366 QEDEKYSVSHSDE-----ITCFEISADSV----------HIISGSRDMSLKVW-----QATGGKL 1410
Fly 1411 S--QVLVGHSDAVTCVAVSVTNKTQVL-SGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKVSAD 1472
Fly 1473 GSTAVSGSDDKTLIVWETKRGLALTSLQMHVPFTHFDISLEVSRVLVQLVDSYNLPVICLHNTPA 1537
Fly 1538 QYVKLPTYSGPSKDVEDLRPQGPKRQMKRLLKKEVSLDTYTWQKKYG------------------ 1584
Fly 1585 -HLTSSVMMAQVD-ERLKRRFSVSASMEEI-SKIAETKTGASQANLGP------EQAALAQSQHF 1640
Fly 1641 DQLEAL--W---NKRSPP 1653 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG30116 | NP_725799.1 | AAA_16 | 359..505 | CDD:289934 | |
| WD40 repeat | 901..937 | CDD:293791 | |||
| WD40 | 933..1282 | CDD:238121 | 12/31 (39%) | ||
| WD40 repeat | 942..982 | CDD:293791 | |||
| WD40 repeat | 988..1024 | CDD:293791 | |||
| WD40 | 1022..1484 | CDD:225201 | 70/270 (26%) | ||
| WD40 repeat | 1029..1064 | CDD:293791 | |||
| WD40 repeat | 1071..1106 | CDD:293791 | |||
| WD40 repeat | 1112..1147 | CDD:293791 | |||
| WD40 repeat | 1216..1252 | CDD:293791 | 1/1 (100%) | ||
| WD40 | 1248..1502 | CDD:238121 | 73/288 (25%) | ||
| WD40 repeat | 1258..1294 | CDD:293791 | 9/35 (26%) | ||
| WD40 repeat | 1299..1335 | CDD:293791 | 10/35 (29%) | ||
| WD40 repeat | 1340..1374 | CDD:293791 | 8/38 (21%) | ||
| WD40 repeat | 1379..1415 | CDD:293791 | 10/52 (19%) | ||
| WD40 repeat | 1421..1458 | CDD:293791 | 13/37 (35%) | ||
| WD40 repeat | 1464..1488 | CDD:293791 | 6/23 (26%) | ||
| Wdsub1 | NP_001014201.1 | WD40 | 4..309 | CDD:238121 | 72/275 (26%) |
| WD 1 | 10..47 | ||||
| WD40 repeat | 16..52 | CDD:293791 | 1/1 (100%) | ||
| WD 2 | 52..91 | 15/46 (33%) | |||
| WD40 repeat | 57..93 | CDD:293791 | 13/43 (30%) | ||
| WD 3 | 95..134 | 12/45 (27%) | |||
| WD40 repeat | 101..136 | CDD:293791 | 10/41 (24%) | ||
| WD 4 | 137..176 | 8/38 (21%) | |||
| WD40 repeat | 143..177 | CDD:293791 | 8/33 (24%) | ||
| WD 5 | 178..228 | 9/49 (18%) | |||
| WD40 repeat | 183..236 | CDD:293791 | 10/52 (19%) | ||
| WD 6 | 237..276 | 13/40 (33%) | |||
| WD40 repeat | 242..266 | CDD:293791 | 9/25 (36%) | ||
| WD 7 | 279..318 | 13/86 (15%) | |||
| WD40 repeat | 284..308 | CDD:293791 | 6/23 (26%) | ||
| SAM_WDSUB1 | 328..399 | CDD:188904 | 12/70 (17%) | ||
| U-box | 404..476 | CDD:398320 | 8/43 (19%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4155 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||