DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and Dcaf10

DIOPT Version :10

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_001101405.1 Gene:Dcaf10 / 313242 RGDID:1304730 Length:563 Species:Rattus norvegicus


Alignment Length:386 Identity:77/386 - (19%)
Similarity:116/386 - (30%) Gaps:192/386 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 LCHLYGQV---GSWFGSTRVHRVIRFAKATPRSAYNLE------LLRVICQQISIIFNIPEGYLP 447
            :.:|||.:   .|.:.|||.|..:          :|||      :|.|.|:|..::.        
  Rat   152 MTNLYGSIHPADSVYLSTRTHGAV----------FNLEYSPDGSVLTVACEQTEVLL-------- 198

  Fly   448 KDASFDPL---YINTWFQNLLRRVEDMGNDVLFL--------------FIDDLHLLNPLDCDIVT 495
                |||:   :|.|    |....||..|::.||              .:.||..||...|.:..
  Rat   199 ----FDPISSKHIKT----LSEAHEDCVNNIRFLDNRLFATCSDDTTIALWDLRKLNTKVCTLHG 255

  Fly   496 ALSWLPTSLPWNVQIICSSTTPVEQLKFTPMQRDRFKSIEYQFDLNMGDYATKLKIPPQCIPGDV 560
            ..||:                               |:|||                      |.
  Rat   256 HTSWV-------------------------------KNIEY----------------------DT 267

  Fly   561 SFALYVEQQFDQLERHYGRQAVGDLASYIT--CSEYGLSETE------LLELLMPTDDPESLIET 617
            :..|.|...||           |::..:.|  |:|.|....:      |:.:.:..|..:.||.|
  Rat   268 NTRLLVTSGFD-----------GNVIIWDTNRCTEDGCPHKKFFHTRFLMRMRLTPDCSKMLIST 321

  Fly   618 KNGHFSFATFKKIHREMDLLLLLHDKIMSGKVLIQWRHNYCASVAKRRYMDVQRTRSLHCELANL 682
            .:|:               ||:|||                        :|:  |:||       
  Rat   322 SSGY---------------LLILHD------------------------LDL--TKSL------- 338

  Fly   683 FFPQDEDESTLENESNRSESKSVISLKDRDREKDSLSAVSAVSAGRKSSST--HHNDDTST 741
                              |..|...|:.|.....|....|:.|:|.:.|.:  ||||..||
  Rat   339 ------------------EVGSYPILRARRTTSSSDLTTSSSSSGSRVSGSPCHHNDSNST 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 WD40 <897..1057 CDD:441893
WD40 repeat 901..937 CDD:293791
WD40 repeat 942..982 CDD:293791
WD40 repeat 988..1024 CDD:293791
WD40 991..1491 CDD:441893
WD40 repeat 1029..1064 CDD:293791
WD40 repeat 1071..1106 CDD:293791
WD40 repeat 1112..1147 CDD:293791
WD40 repeat 1216..1252 CDD:293791
WD40 repeat 1258..1294 CDD:293791
WD40 repeat 1299..1335 CDD:293791
WD40 repeat 1340..1374 CDD:293791
WD40 repeat 1379..1415 CDD:293791
WD40 repeat 1421..1458 CDD:293791
WD40 repeat 1464..1488 CDD:293791
Dcaf10NP_001101405.1 WD40 <168..323 CDD:475233 48/244 (20%)
WD40 repeat 176..211 CDD:293791 12/50 (24%)
WD40 repeat 218..254 CDD:293791 8/35 (23%)
WD40 repeat 260..286 CDD:293791 10/89 (11%)
WD40 521..559 CDD:197651
Blue background indicates that the domain is not in the aligned region.

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