Sequence 1: | NP_725799.1 | Gene: | CG30116 / 37126 | FlyBaseID: | FBgn0028496 | Length: | 1922 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948680.1 | Gene: | Nwd2 / 289633 | RGDID: | 1563065 | Length: | 1742 | Species: | Rattus norvegicus |
Alignment Length: | 1959 | Identity: | 364/1959 - (18%) |
---|---|---|---|
Similarity: | 695/1959 - (35%) | Gaps: | 546/1959 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 TRLPKPLL-----IKIYVASLKQEFNQERRMLLELVGPELQSL-YDDRQIELEFVDMHFGTGDLE 79
Fly 80 VHQLERD-PYLIHDYLHEIDTCHAHTKSVFFMVLVGDGIGRQLLPTKIDEDIFSAVLADQQTSAD 143
Fly 144 HEAMLVK-WYERD---------------------------------------ASQTQRQLKQDYR 168
Fly 169 LMNVDAWLAESQRMQ---SFLEQAFQSLLQGSGASGRSPDFMER-VQLLRR-TQIER-----EVS 223
Fly 224 QAMAL--TSEKILAVFRERAAQCSKGDVEAAERLRKIKDELTMNLSTDNHTTLVVPGSAASEAID 286
Fly 287 PDNEDHESYL----SKFKNKVTDKLRLLIEAHITNDPDVI-------KGRKKTVQEIFHEHATHL 340
Fly 341 RILREHTDSDALVESRVPQQLRQNLMANFRNGSRHA-PYFLCGADGSGKSAILCHLYGQVGSWFG 404
Fly 405 STRVHR----------VIRFAKATPRSAYNLELLRVICQQISIIFN-IPEGYLPKDASFDPLYIN 458
Fly 459 TWFQNLLRRVEDMGNDVLFLFIDDLHLLNPLDCDIVTALSWLPTSLPWNVQIICSSTTP-----V 518
Fly 519 EQLKFTPMQRDRF------------KSIEYQF-----------DLNMGDYATKLKIP-------- 552
Fly 553 --------------PQCIPGDVSFALYVEQQFDQLERHYGRQAVGDLASYITCSEYGLSETELLE 603
Fly 604 LL-MPTDDPESLIE-TKNGHFSFATFKKIHR-EMDLLLLLHDKIMSGKVLIQWRHNYCASVAKRR 665
Fly 666 YM-DVQRTRSLHCELANLFF---------------PQDEDESTLENESNRSESKSVISLKDRDRE 714
Fly 715 KDSLSAVSAVSAGRKSSSTHHNDDTSTFY-NPIAADVSY-SMRHVEESWHHLMRSDDTTRFKQIA 777
Fly 778 VCNFDFLLAAVQTVSISYLRCLIEHVRCYILDRDIELIYYTIRKSSDVLTRDPMQLGSQLISWLR 842
Fly 843 PISEHDDDDNSLLSMTVRSATAWCDGYAVPLLVPL-----TGWLPAPLPSQIRTMTVSGTGCIRA 902
Fly 903 VWLAPSKQH------------LILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLL-VAPQSDSE 954
Fly 955 LLLTGSEDATVLVW-HVG---LRERRAHIKNAH--TAP--ITGVAAGANNTLI-ISSSEDASIAI 1010
Fly 1011 TDLASG----------------------------KLRHRITHHRGPVSGIVVAGACDVL--ISGG 1045
Fly 1046 L------------------DRTICVWDLDNFTLLNTMQMT---------SAVLRIDISWNSVFLL 1083
Fly 1084 ALCEDNALYVRTLATG--KELHTLKG-HKSKIRSISIGKDSQRCVVGCDDTRALIY-DMHAGKLV 1144
Fly 1145 RSLPPNPGPVTAVHAMDNDDFLVTVGGNKITFYSFRNEELYVNPYSRHPRRKRSLKRHAQAQRSP 1209
Fly 1210 STTLPPITCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEFLATGSE 1274
Fly 1275 DRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTIQGP-Y 1338
Fly 1339 KSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSHSDEITCFEISADSVHI-ISGSRDMSLKV 1402
Fly 1403 WQATGGKLSQVLVGHSDAVT---------CVAVSVTNKTQVLSGSKDMNLILWDLLTGE----EV 1454
Fly 1455 HTLAGHLGPVIGVKVSADGSTAVSGSDDKTL-----------------IVWE---TKRGLALTSL 1499
Fly 1500 QMHVPFTHFDISLE----VSRVLVQLVDSYNLPVICLHNTPAQYVKLPTYSGPSKDVEDLRPQGP 1560
Fly 1561 KRQMKRLLKKEVSLDTYTWQKKYGHLTSSVMMAQVDERLKRRFSVSASMEEISKIAETKTGASQA 1625
Fly 1626 NLGPEQAALAQSQHFD-QLEALWN-------KRSP-------------PRRRHNAGLSRQTSLVE 1669
Fly 1670 DRLESSDDD 1678 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG30116 | NP_725799.1 | AAA_16 | 359..505 | CDD:289934 | 31/157 (20%) |
WD40 repeat | 901..937 | CDD:293791 | 8/47 (17%) | ||
WD40 | 933..1282 | CDD:238121 | 68/419 (16%) | ||
WD40 repeat | 942..982 | CDD:293791 | 11/44 (25%) | ||
WD40 repeat | 988..1024 | CDD:293791 | 9/64 (14%) | ||
WD40 | 1022..1484 | CDD:225201 | 93/509 (18%) | ||
WD40 repeat | 1029..1064 | CDD:293791 | 9/54 (17%) | ||
WD40 repeat | 1071..1106 | CDD:293791 | 10/36 (28%) | ||
WD40 repeat | 1112..1147 | CDD:293791 | 5/35 (14%) | ||
WD40 repeat | 1216..1252 | CDD:293791 | 3/35 (9%) | ||
WD40 | 1248..1502 | CDD:238121 | 57/288 (20%) | ||
WD40 repeat | 1258..1294 | CDD:293791 | 10/35 (29%) | ||
WD40 repeat | 1299..1335 | CDD:293791 | 9/35 (26%) | ||
WD40 repeat | 1340..1374 | CDD:293791 | 9/33 (27%) | ||
WD40 repeat | 1379..1415 | CDD:293791 | 7/36 (19%) | ||
WD40 repeat | 1421..1458 | CDD:293791 | 10/49 (20%) | ||
WD40 repeat | 1464..1488 | CDD:293791 | 3/40 (8%) | ||
Nwd2 | XP_038948680.1 | AAA_16 | 394..523 | CDD:404141 | 30/163 (18%) |
WD40 | <922..1207 | CDD:225201 | 59/324 (18%) | ||
WD40 repeat | 1013..1063 | CDD:293791 | 13/51 (25%) | ||
WD40 repeat | 1068..1095 | CDD:293791 | 7/28 (25%) | ||
WD40 | 1100..1435 | CDD:225201 | 72/407 (18%) | ||
WD40 repeat | 1102..1137 | CDD:293791 | 6/39 (15%) | ||
WD40 repeat | 1145..1184 | CDD:293791 | 4/41 (10%) | ||
WD40 repeat | 1278..1324 | CDD:293791 | 6/106 (6%) | ||
WD40 repeat | 1361..1393 | CDD:293791 | 7/31 (23%) | ||
WD40 repeat | 1444..1469 | CDD:293791 | 6/26 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |