DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and WDSUB1

DIOPT Version :10

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:NP_689741.2 Gene:WDSUB1 / 151525 HGNCID:26697 Length:476 Species:Homo sapiens


Alignment Length:470 Identity:103/470 - (21%)
Similarity:174/470 - (37%) Gaps:119/470 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1250 LEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLM-DSLRVIS 1313
            |:.||..|.|..|:|:|..||:.|.|....:||...|::....:..:...|:|.... ||..:.|
Human    50 LKFHTYAVHCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLAS 114

  Fly  1314 TDRDSMLLVWMAHSGNLLQ---TIQGPYKSLSVTNNMRFAVSTNGDNTLKIWSLTQEDEKYSVSH 1375
            ...|..:::|.|.|..|.:   ...|...:.:.:.|..|.|:.:....|.:|     |:|....|
Human   115 GAADGTVVLWNAQSYKLYRCGSVKDGSLAACAFSPNGSFFVTGSSCGDLTVW-----DDKMRCLH 174

  Fly  1376 SDE-----ITCFEISADSV----------HIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVA 1425
            |::     |||.:.|:..|          .:.|..:|..:|:|                     .
Human   175 SEKAHDLGITCCDFSSQPVSDGEQGLQFFRLASCGQDCQVKIW---------------------I 218

  Fly  1426 VSVTNKTQVLSGSKDMNLILWDLLTGEEV---HTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIV 1487
            ||.|:                  :.|.|:   .||:||..||:....|.||...||||.||::||
Human   219 VSFTH------------------ILGFELKYKSTLSGHCAPVLACAFSHDGQMLVSGSVDKSVIV 265

  Fly  1488 WETKRGLALTSLQMHVPFT---------------HFDISLEVSRVLVQLVDSYNLPVICLHNTPA 1537
            ::|.....|.:|..|..:.               ..|.::.:.:        ::|..:|......
Human   266 YDTNTENILHTLTQHTRYVTTCAFAPNTLLLATGSMDKTVNIWQ--------FDLETLCQARRTE 322

  Fly  1538 QYVKLPTYSGPSKDV------EDLRPQGPKRQMKRLLKKEVSLDTYTWQKKYGHLTSSVMMAQVD 1596
            ..:|..|.....:||      :||:......:|..:..||:.           :||...:...:.
Human   323 HQLKQFTEDWSEEDVSTWLCAQDLKDLVGIFKMNNIDGKELL-----------NLTKESLADDLK 376

  Fly  1597 -ERLKRRFSVSASMEEI-SKIAETKTGASQANLGP------EQAALAQSQHFDQLEALWNKRSPP 1653
             |.|..|..|...:||: :|:....:|.....:.|      :...:|...:..:.||:.|..|..
Human   377 IESLGLRSKVLRKIEELRTKVKSLSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKK 441

  Fly  1654 RRRHNAGLSRQTSLV 1668
            :|     .|..|:||
Human   442 KR-----TSPMTNLV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 WD40 <897..1057 CDD:441893
WD40 repeat 901..937 CDD:293791
WD40 repeat 942..982 CDD:293791
WD40 repeat 988..1024 CDD:293791
WD40 991..1491 CDD:441893 66/262 (25%)
WD40 repeat 1029..1064 CDD:293791
WD40 repeat 1071..1106 CDD:293791
WD40 repeat 1112..1147 CDD:293791
WD40 repeat 1216..1252 CDD:293791 1/1 (100%)
WD40 repeat 1258..1294 CDD:293791 11/35 (31%)
WD40 repeat 1299..1335 CDD:293791 10/39 (26%)
WD40 repeat 1340..1374 CDD:293791 7/33 (21%)
WD40 repeat 1379..1415 CDD:293791 9/45 (20%)
WD40 repeat 1421..1458 CDD:293791 6/39 (15%)
WD40 repeat 1464..1488 CDD:293791 11/23 (48%)
WDSUB1NP_689741.2 WD40 <3..311 CDD:441893 71/312 (23%)
WD 1 10..47
WD40 repeat 16..52 CDD:293791 1/1 (100%)
WD 2 52..91 14/38 (37%)
WD40 repeat 57..93 CDD:293791 12/35 (34%)
WD 3 95..134 10/38 (26%)
WD40 repeat 101..135 CDD:293791 9/33 (27%)
WD 4 137..176 9/43 (21%)
WD40 repeat 142..177 CDD:293791 9/39 (23%)
WD 5 178..228 13/88 (15%)
WD40 repeat 183..236 CDD:293791 15/91 (16%)
WD 6 237..276 17/38 (45%)
WD40 repeat 242..266 CDD:293791 11/23 (48%)
WD 7 279..318 4/46 (9%)
WD40 repeat 284..326 CDD:293791 3/49 (6%)
SAM_WDSUB1 328..399 CDD:188904 17/81 (21%)
U-box 404..476 CDD:398320 11/53 (21%)
Blue background indicates that the domain is not in the aligned region.

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