DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30116 and ttc41

DIOPT Version :9

Sequence 1:NP_725799.1 Gene:CG30116 / 37126 FlyBaseID:FBgn0028496 Length:1922 Species:Drosophila melanogaster
Sequence 2:XP_005164667.3 Gene:ttc41 / 101885759 ZFINID:ZDB-GENE-110914-190 Length:1167 Species:Danio rerio


Alignment Length:1157 Identity:225/1157 - (19%)
Similarity:382/1157 - (33%) Gaps:418/1157 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 ELVGPELQS----LYDDRQIELEFVDMH---------------FGTGDLEVHQLERDPYLIHDYL 94
            |:..|.||.    :.||.|.:|.::..:               |...||:..:.:||.  .:::.
Zfish     9 EVDSPSLQPYLCYVPDDLQEDLFYLKYNIFSHLDALCQTRGTCFRPMDLQRSKQDRDD--ANNHK 71

  Fly    95 HEIDTCHAHTK--------SVFFMVLVGDGIGRQLLPTKIDEDIFSA------------------ 133
            ::.|......|        |.||:.|:|...| |.||     ||.|.                  
Zfish    72 NDSDLFDQQLKISLDLVDRSSFFICLLGHSYG-QCLP-----DIESCSSSEVVRKLNIAASSGYP 130

  Fly   134 -VLADQ-QTSADHEAMLVK-----------WYERDASQTQRQLKQDYRLMNVDAWLAESQRMQSF 185
             ||.|: :|.:..|..:.|           :|.:|.:....:...|....:.|.    |:.|..|
Zfish   131 WVLEDEYRTCSLTELEITKAAFIDNHRLCFFYFKDYTPQDTEDDDDDDDNDDDG----SEEMSIF 191

  Fly   186 LEQAFQSLLQGSGASGRSPDFMERVQLLRRTQIEREVSQAMALTSEKILAVFRERAAQCSKGDVE 250
            |:.          .|.:|....:|::.|:|    |.::..:.      :..||.:        .|
Zfish   192 LDM----------LSKQSQRERQRLRDLKR----RIINHCLP------VRFFRNQ--------YE 228

  Fly   251 AAERLRKIKDELTMNLSTDNHTTLVVPGSAASEAIDPDNEDHESYLSKFKNKVTDKLRLLIEAHI 315
            ..|.:||..:|....:|.|:...:    |...::.  |...|:||           .|.|....:
Zfish   229 LGEMIRKDWEEGISKISKDSKHLI----SGWQDSF--DLHSHKSY-----------SRALCNWFV 276

  Fly   316 TNDP--DVIKGRKKTVQEIFH--EHATHLRILREHTDSDALVESRVPQQLRQNLMANFRNGSRHA 376
            .:.|  :.:....|.:..:.|  ::.||.:      :..||..|.:             |.|..:
Zfish   277 PSVPATETLNAFDKFLHPVTHNAKYETHAK------NPGALFNSDL-------------NDSEKS 322

  Fly   377 PYFLCGADGSGKSA-----------------ILCHLYGQVGSWFGSTRVHRVIRFAKATPRSAYN 424
            ...:.|..|.|||.                 ::.|..|...|   ||.|..::|...|..|.|:|
Zfish   323 VLVISGERGCGKSTLAAWCLQTFSEQNPDLPVIRHFCGTSTS---STDVRSLLRLCTAQLRKAHN 384

  Fly   425 LELLRVICQQISIIFNIPEGYLPKDASFDPLYINT-WFQNLLRRVEDMGNDV----LFLFIDDLH 484
                               |..|   .:|....|| .|:.|.|.|:.....|    ..|.||.:.
Zfish   385 -------------------GDSP---DWDESLENTSEFEYLHRAVQAFTAAVNLRPCILLIDGID 427

  Fly   485 LLNP---LDCDIVTALSWLPTSLPWNVQIICSSTTPVEQLKFTPMQRDRFKSIEYQFDLNMGDYA 546
            ||..   |....|.:|.|||..||...::|.::|       ||.:..   ||...:.|:.:    
Zfish   428 LLTETLGLSKQEVKSLQWLPAVLPPFCKMIITTT-------FTDLTH---KSFSCRTDVQI---- 478

  Fly   547 TKLKIPPQCIPGDVSFALYVEQQFDQLERHYGRQAVGDLASYITCSEYGLSETELLELLMPTDDP 611
              ||.||  .| |.|..|.:      |.:|                           |.:|:.:|
Zfish   479 --LKCPP--FP-DPSVKLSI------LLKH---------------------------LSLPSQEP 505

  Fly   612 ESLIETKNGH---------------FSFATFKKIHREMDLL--LLLHDKI--MSGKVLIQWRHNY 657
            .|::..:..|               .:....:|...||:||  ....|.:  :..||:.:|..:|
Zfish   506 PSVVLQRMVHKCRSPAFLALVGTELRTCGVLRKKEEEMELLKEYAEADSVPELWVKVIHRWVKDY 570

  Fly   658 CAS-----VAKRRYMDVQRTRS-------------LHCELANLFFPQD----ED--------EST 692
            ..|     |...:..:...:.|             :|...|.|...|.    ||        ...
Zfish   571 SRSAPSEDVTSSKVTETHTSPSEGLSGWVWDTLCLIHVSRAGLTEAQVLVLLEDLGYWGHLRVQV 635

  Fly   693 LENESNRS--------ESKSVISLKDRDREKDSLS-AVSAVSAGRKSSSTHHNDDTSTFYNPIAA 748
            ||....||        ::..::.:|.:     ||| |::.:..|.:..:|:| ...:||:....:
Zfish   636 LEWARLRSAIWPWIQEKASGLLIIKQK-----SLSLAMNLLLNGTEGQNTYH-QILATFFQKSNS 694

  Fly   749 DVSYSMRHVEESWHHLMRSDDTTRFKQIAVCNFDFLL--AAVQTVSISYLRCLIEHVRCYILDRD 811
            |:|::.:..|..||.:    .|:.||::    .:||:  |.|:.:|.:..|  ..|     |..|
Zfish   695 DISWAQKMEEIPWHFI----QTSSFKEL----HEFLINPATVEFLSSNLKR--YPH-----LSTD 744

  Fly   812 IELIYYTI--RKSSDVL-------------TRDPMQLG------SQLISWLRPISEHD------- 848
            : :.|:|:  :|..|.:             |.||.:|.      |:::.::..:...:       
Zfish   745 V-IHYWTLLRKKGFDPVVSFQNLITQTYADTPDPSRLSRLSLFCSKVLLYMGEMRTTEEMLLQAD 808

  Fly   849 ---------DDDNSLLSMTVRSATAWCDGYAVPLLVPLTGWLPAPLPSQIRTMTVSGTGCIRAVW 904
                     |.|:..|.:.|:...|       .|.|.:      .||..|......|....|:  
Zfish   809 QILQKTVELDSDSMRLQLNVQHMMA-------ELYVQM------HLPKDIEMFCHKGLETARS-- 858

  Fly   905 LAPSKQHLILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWH 969
                                         :.:.|..:|...|:..|....|.:...|:..:....
Zfish   859 -----------------------------LTEAHLDSVEVKLIVGQLLCRLCMALLEEGRLFAVP 894

  Fly   970 VGLRE-RRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLASGKLRH 1020
            ...|| |.|...:||..        |..|::|..      ||..|:.|:|::
Zfish   895 ELFREIRSARYTSAHPC--------AEGTVMILK------AIHKLSFGELKN 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30116NP_725799.1 AAA_16 359..505 CDD:289934 39/170 (23%)
WD40 repeat 901..937 CDD:293791 1/35 (3%)
WD40 933..1282 CDD:238121 20/89 (22%)
WD40 repeat 942..982 CDD:293791 9/40 (23%)
WD40 repeat 988..1024 CDD:293791 8/33 (24%)
WD40 1022..1484 CDD:225201
WD40 repeat 1029..1064 CDD:293791
WD40 repeat 1071..1106 CDD:293791
WD40 repeat 1112..1147 CDD:293791
WD40 repeat 1216..1252 CDD:293791
WD40 1248..1502 CDD:238121
WD40 repeat 1258..1294 CDD:293791
WD40 repeat 1299..1335 CDD:293791
WD40 repeat 1340..1374 CDD:293791
WD40 repeat 1379..1415 CDD:293791
WD40 repeat 1421..1458 CDD:293791
WD40 repeat 1464..1488 CDD:293791
ttc41XP_005164667.3 DUF4062 <79..108 CDD:315852 10/34 (29%)
P-loop_NTPase 322..501 CDD:328724 57/255 (22%)
TPR_12 915..>965 CDD:315987 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19871
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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