DRSC/TRiP Functional Genomics Resources

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Protein Alignment rswl and TRM10

DIOPT Version :9

Sequence 1:NP_611335.1 Gene:rswl / 37124 FlyBaseID:FBgn0034351 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_014548.1 Gene:TRM10 / 854060 SGDID:S000005453 Length:293 Species:Saccharomyces cerevisiae


Alignment Length:329 Identity:87/329 - (26%)
Similarity:133/329 - (40%) Gaps:65/329 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LSNDTISENKEERDKRLKVLQLEADIAHQEGRRVPSLEFFKDHHWEHVLTLPTKSARIKYFGYLW 120
            :|||.|::| ||:.||...|.             |..|......|:                   
Yeast     1 MSNDEINQN-EEKVKRTPPLP-------------PVPEGMSKKQWK------------------- 32

  Fly   121 QIEMKKEADQRKKAERAK-EAERRVAE--MRKEREENTHIIYGLGHTSLFLRIYDTTINHWQNNR 182
              :|.|.  ||.:..:|| .|||||.:  :|.||..........|.......|.:..||..|.:.
Yeast    33 --KMCKR--QRWEENKAKYNAERRVKKKRLRHERSAKIQEYIDRGEEVPQELIREPRINVNQTDS 93

  Fly   183 LTRAMQFAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSRCMQSLQ 247
                   ..:::||||:||.||::|....:.|:...::.||..:     |:...::.....:..|
Yeast    94 -------GIEIILDCSFDELMNDKEIVSLSNQVTRAYSANRRAN-----HFAEIKVAPFDKRLKQ 146

  Fly   248 RYIPTMHNPEFPINLHSKCF--------TELFPKQNLVYLTPHCREDLVTYNPDDIYIVGAMVDT 304
            |:..|:.|..:....|.|..        .|...|..:||||....|.|....|...||||.:||.
Yeast   147 RFETTLKNTNYENWNHFKFLPDDKIMFGDEHISKDKIVYLTADTEEKLEKLEPGMRYIVGGIVDK 211

  Fly   305 MNNEPLSLAKAKRLGLRMARLPLDRYLQWGSGSGKS-LTLNQMINIMLDLKKTGDWDTALKHV-P 367
            ...:.|.|.||:::|:...|||:|.|:..   .|:. ||...::.:||......:|..|.:.| |
Yeast   212 NRYKELCLKKAQKMGIPTRRLPIDEYINL---EGRRVLTTTHVVQLMLKYFDDHNWKNAFESVLP 273

  Fly   368 RRKV 371
            .||:
Yeast   274 PRKL 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rswlNP_611335.1 tRNA_m1G_MT 201..370 CDD:294285 48/178 (27%)
TRM10NP_014548.1 SPOUT_Trm10-like 97..271 CDD:349962 51/181 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344027
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2967
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13563
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1545
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.870

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