DRSC/TRiP Functional Genomics Resources

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Protein Alignment rswl and trmt10a

DIOPT Version :9

Sequence 1:NP_611335.1 Gene:rswl / 37124 FlyBaseID:FBgn0034351 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001373288.1 Gene:trmt10a / 560222 ZFINID:ZDB-GENE-130530-594 Length:340 Species:Danio rerio


Alignment Length:415 Identity:82/415 - (19%)
Similarity:158/415 - (38%) Gaps:111/415 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 QPAPALSNDTISENKEE--RDKRLKVLQLEADIAHQEGRRVPSLEFFKDHHWEHVLTLPTKSARI 113
            :||...|:...:.|:.|  :|::..:...|.:...:..|:    :..|...||....|       
Zfish     8 EPAVQESHHECANNENEPAKDEKDTLQTGEVETMSKRQRK----KLLKSQQWEEQREL------- 61

  Fly   114 KYFGYLWQIEMKKEADQRKKAERAKEAERRVAEMRKEREENTHIIYGLGHTSLFLRIYDTTINHW 178
                   :.:.:||..|::|.||..:.:..|                                .|
Zfish    62 -------RKQKRKERKQQRKLERQAQGDDGV--------------------------------EW 87

  Fly   179 Q-NNRLTRAMQ-FAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSR 241
            . ..||.|:.: .:.::::|||:|..|..::.....||:..|:||||                 |
Zfish    88 TGKKRLRRSAEPSSLRLIIDCSFDNLMVLKDVKKLHKQIQRCYAENR-----------------R 135

  Fly   242 CMQSLQRYIPTMHNPEF---------------PINLHSKCFTELFPKQNLVYLTPHCREDLVTYN 291
            .:...|.|: |.|..:.               .:::.:..|.|:..|::|||||......|...:
Zfish   136 TLHPAQFYL-TSHGGQLKQIMDEINKGWVNWKDVHVKTDAFHEILKKEDLVYLTSDSPNVLQELD 199

  Fly   292 PDDIYIVGAMVDTMNNEPLSLAKAKRLGLRMARLPLDRYLQWGSGSGKSLTLNQMINIMLDLKKT 356
            .:..|::|.:||..:::.::...|:.||:..|:|||..:::  ..|.|.|.:|.:..|:|...:.
Zfish   200 ENKAYVIGGLVDHNHHKGITFNLAQELGIAHAQLPLGSFVK--MNSRKVLAVNHVFEIILAFLEK 262

  Fly   357 GDWDTALKHV-PRRKVVQNEFQPRREKDHWSTGTRARKLNMRIDHLFDFDENRRQATSYATPQNV 420
            .||..|...| |:||                     ..:.|..::....||:..::...:..:::
Zfish   263 RDWREAFFTVLPQRK---------------------GAVPMGQENTLGKDEDEEESDDDSDSEHL 306

  Fly   421 RQRREGLEFQLDTWATGKQKKKQRQ 445
            .:||...:.|.|.....:.|:...|
Zfish   307 SERRTDSKDQSDNKQDEEHKRVPNQ 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rswlNP_611335.1 tRNA_m1G_MT 201..370 CDD:294285 44/184 (24%)
trmt10aNP_001373288.1 Trm10euk_A 102..277 CDD:349974 48/194 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2967
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1545
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.840

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