DRSC/TRiP Functional Genomics Resources

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Protein Alignment rswl and Trmt10c

DIOPT Version :9

Sequence 1:NP_611335.1 Gene:rswl / 37124 FlyBaseID:FBgn0034351 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_083368.1 Gene:Trmt10c / 52575 MGIID:1196261 Length:414 Species:Mus musculus


Alignment Length:424 Identity:135/424 - (31%)
Similarity:207/424 - (48%) Gaps:49/424 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKHFAR-------WRLGSQLLKGCAAPVRQASKTSSAENLIAGTEE----PQKKFVNPF-SQPAP 54
            |:.|||       .|..|.|..|    |.|...:|.|.:|....::    |::..::.: :....
Mouse     8 LRPFARCLVPYTFHRKRSHLYSG----VLQRYMSSKAPSLSCHNKDSASPPEQLELDGWKATMKS 68

  Fly    55 ALSNDTISENKEERDKRLKVLQLEADIAHQEGRRVPSLEFFKDHHWEHVLTLPTKSARIKYFGYL 119
            ::..|.:||..::.:..|...:...::....|:.||  |...:...:.::...:|||:.||..||
Mouse    69 SIQEDGVSEVSDKDEDSLASTRELIEMWRLLGKEVP--EHITEEDLKTLMECASKSAKKKYLRYL 131

  Fly   120 WQIEMKKEADQRK---KAERAKEAER-RVAEMRKEREENTHIIYGLGHTSLFLRIYDTTIN---H 177
            :..|..|:|.|.|   |||..:||:| |:.|...|.::...         :|||::|..||   .
Mouse   132 YGKEKAKKAKQVKKEMKAEAREEAKRARLLETTAEEQQQDF---------MFLRLWDRQINIALG 187

  Fly   178 WQNNRLTRAMQFAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSRC 242
            |:.   .:||||...:|.|.:||.:|...|......||:.....||.|.:||.:::||.::||..
Mouse   188 WKG---VQAMQFGQPLVFDMAYDNYMKPSELQNTVSQLLESEGWNRRNVDPFHIYFCNLKIDSAY 249

  Fly   243 MQSL-QRYIPTMHNPEFPINLHSKCFTELFPKQNLVYLTPHCREDLVTYNPDDIYIVGAMVDTMN 306
            .:.| :||....  .:..:....|...:||||.:::|||......:.|:..|.|||:|:.||...
Mouse   250 HRELVKRYREKW--DKLLLTATEKSPVDLFPKDSIIYLTADSPNVMTTFKHDKIYIIGSFVDKNT 312

  Fly   307 NEPLSLAKAKRLGLRMARLPLDRYLQWGSGSGKSLTLNQMINIMLDLKKTGDWDTALKHVPRRKV 371
            ....||||||||.:....||||:||||..|: |:|||:|||.|:|.||.||:|:.|||.|||||.
Mouse   313 QTGTSLAKAKRLNIATECLPLDKYLQWEIGN-KNLTLDQMIRILLCLKNTGNWEEALKFVPRRKH 376

  Fly   372 V--------QNEFQPRREKDHWSTGTRARKLNMR 397
            .        ..|...:.:|.......|...||:|
Mouse   377 TGYLEVSEQSQELVRKLKKTKTLNSFRKGSLNVR 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rswlNP_611335.1 tRNA_m1G_MT 201..370 CDD:294285 69/169 (41%)
Trmt10cNP_083368.1 tRNA_m1G_MT 208..375 CDD:280003 69/169 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837926
Domainoid 1 1.000 126 1.000 Domainoid score I5429
eggNOG 1 0.900 - - E1_KOG2967
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9858
Inparanoid 1 1.050 171 1.000 Inparanoid score I4114
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46657
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006087
OrthoInspector 1 1.000 - - oto93153
orthoMCL 1 0.900 - - OOG6_107771
Panther 1 1.100 - - LDO PTHR13563
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1545
SonicParanoid 1 1.000 - - X5012
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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