DRSC/TRiP Functional Genomics Resources

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Protein Alignment rswl and trmt10c

DIOPT Version :9

Sequence 1:NP_611335.1 Gene:rswl / 37124 FlyBaseID:FBgn0034351 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001096307.1 Gene:trmt10c / 100124885 XenbaseID:XB-GENE-877279 Length:448 Species:Xenopus tropicalis


Alignment Length:376 Identity:118/376 - (31%)
Similarity:196/376 - (52%) Gaps:31/376 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LSNDTISENKEERDKRLKVLQLEADIAHQEGRRVPSLEFFKDHHWEHVLTLPTKSARIKYFGYLW 120
            :.|..:.:.:.:.|..|..:|...::....||.||  :.......:.::.||||:||.||..||.
 Frog    73 IGNAEMVKTETQEDSSLNEMQELVEMWRLAGRAVP--QSITTEQLQVLMELPTKTARKKYLKYLS 135

  Fly   121 QIEMKKEADQRKKAERAKEAERRVAEM-RKEREENTHIIYGLGHTSLFLRIYDTTINHWQNNRLT 184
            ..|:.| .::::|.:..||::.::..: :.|.:|:|    .....:..|.::|.:|:..|..:..
 Frog   136 VREVMK-TNRKEKKKELKESKSKIESLDQLETKEDT----PEKKNTFLLHVWDKSIDTMQRWKCV 195

  Fly   185 RAMQFAPKMVLDCSYDEHMNNREATYAAKQLMMCFAENRMNDEPFDLHYCNTQMDSRCMQSL-QR 248
            :||:|...:|.|..|:::|:..|......|||.....||.:.:||.:::|:.|..|...:.| :|
 Frog   196 QAMKFGQPLVFDMVYEKNMSRYELENTVCQLMESEGWNRRSTDPFHIYFCSLQPYSMYHKELVKR 260

  Fly   249 YIPTMHNPEFPINLHSKCFTELFPKQNLVYLTPHCREDLVTYNPDDIYIVGAMVDTMNNEPLSLA 313
            ||....|  ..:....|...|:|||:.|||||.....:|..::...|||:|::||......||||
 Frog   261 YIGAWDN--VFVTATDKSHVEMFPKEQLVYLTADSPNELKHFDHTKIYIIGSLVDRCQQTGLSLA 323

  Fly   314 KAKRLGLRMARLPLDRYLQWGSGSGKSLTLNQMINIMLDLKKTGDWDTALKHVPRRKVVQNEFQP 378
            .||||.|..|||||||||:|..|: |:|||:|||.|:|.||.||||..||..||.||        
 Frog   324 NAKRLNLATARLPLDRYLKWDVGA-KNLTLDQMIRILLCLKDTGDWKKALSFVPNRK-------- 379

  Fly   379 RREKDHWSTGTRARKLNMRIDHLFDFDENRRQATSYATPQNVRQRREGLEF 429
               .|.::....::|.|::.|...::        :.:|.:|:::..:..:|
 Frog   380 ---HDGFAEPAASKKRNIKNDGGMEY--------AASTKRNLQKNSKMYKF 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rswlNP_611335.1 tRNA_m1G_MT 201..370 CDD:294285 73/169 (43%)
trmt10cNP_001096307.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..167 4/22 (18%)
tRNA_m1G_MT 214..379 CDD:294285 73/167 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..448
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5346
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9858
Inparanoid 1 1.050 170 1.000 Inparanoid score I4008
OMA 1 1.010 - - QHG46657
OrthoDB 1 1.010 - - D1569668at2759
OrthoFinder 1 1.000 - - FOG0006087
OrthoInspector 1 1.000 - - otm48300
Panther 1 1.100 - - O PTHR13563
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1545
SonicParanoid 1 1.000 - - X5012
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

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