DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prp19 and PRP4

DIOPT Version :9

Sequence 1:NP_523783.1 Gene:Prp19 / 37123 FlyBaseID:FBgn0261119 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_015504.1 Gene:PRP4 / 856307 SGDID:S000006382 Length:465 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp19NP_523783.1 Ubox 2..68 CDD:128780
Prp19 69..132 CDD:285771
WD40 210..503 CDD:238121
WD40 <225..505 CDD:225201
WD40 repeat 269..305 CDD:293791
WD40 repeat 310..345 CDD:293791
WD40 repeat 354..389 CDD:293791
WD40 repeat 395..431 CDD:293791
WD40 repeat 438..484 CDD:293791
PRP4NP_015504.1 HIP1_clath_bdg 128..175 CDD:406822
WD40 175..465 CDD:238121
WD40 repeat 178..216 CDD:293791
WD40 repeat 222..263 CDD:293791
WD40 repeat 268..304 CDD:293791
WD40 repeat 311..346 CDD:293791
WD40 repeat 352..387 CDD:293791
WD40 repeat 396..434 CDD:293791
WD40 repeat 440..464 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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