DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp19 and CG9799

DIOPT Version :10

Sequence 1:NP_523783.1 Gene:Prp19 / 37123 FlyBaseID:FBgn0261119 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_650284.2 Gene:CG9799 / 41647 FlyBaseID:FBgn0038146 Length:922 Species:Drosophila melanogaster


Alignment Length:333 Identity:71/333 - (21%)
Similarity:133/333 - (39%) Gaps:70/333 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 AEVIQKLQDKATVLTQERKKRGR---------TVPEDLVTTDQVKNFLTVASHPGLHSASVPGIL 226
            :|.:.|...:||...:..||:.|         .:.|....|.:.|.:..:|:   :|:    |::
  Fly   366 SESLNKSMGRATYNPKATKKKNRFEHDKFGMPPILEFTSDTAREKEWDNIAA---IHA----GVI 423

  Fly   227 ALDINS------ADHSKILTGGNDKNATVFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSP 285
            .....|      .:|..:.....:.|.|.|..:|..:|....|              :.||.|..
  Fly   424 QTTTWSFGKNRMGEHRLVPKQFQNSNRTNFQNETTCIVLTHCG--------------NFVIIGYS 474

  Fly   286 DMNIRIWHVPTSQTQLLLR------CHEGPVTGLSLHPTGDYLLSTSSD---KHWAFSDIRTGRL 341
            ..:|..:::.:.    |.|      .|:..|.||:.......::|..|:   |.|:|.    |: 
  Fly   475 SGDIERFNIQSG----LHRATYGSPAHKMAVRGLASDNLNQTVISGCSEGLLKFWSFK----GK- 530

  Fly   342 LTKVIDTAEV--GLTTAQFHPDGLIFGTGTVDSQVKIWDLKEQSNVANFPGHTGPISAISFSENG 404
            :.|.:.|..:  |:...:.|.:..:...|....::.:.|:..:..|..|.|||..::.::||.:.
  Fly   531 VDKPLATLRLADGIALIRQHRESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDS 595

  Fly   405 YYLATAADDACVKLWDLRKLKNFKTIQLDDGYEVKDLCFDQS----GTYLAIAGSD-VRVYLCKQ 464
            .:|.|||.|:.:|:||:      .:..:.|.:.|:..|...|    |.:||.|... :.:||   
  Fly   596 RWLITAAMDSTIKVWDI------PSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIYL--- 651

  Fly   465 WQELKVFN 472
            |....:||
  Fly   652 WANKTLFN 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp19NP_523783.1 RING-Ubox_PRP19 3..56 CDD:438318
Prp19 69..133 CDD:400774
WD40 210..503 CDD:238121 61/285 (21%)
WD40 repeat 269..305 CDD:293791 6/41 (15%)
WD40 repeat 310..345 CDD:293791 9/37 (24%)
WD40 repeat 354..389 CDD:293791 4/34 (12%)
WD40 repeat 395..431 CDD:293791 10/35 (29%)
WD40 repeat 438..484 CDD:293791 12/40 (30%)
CG9799NP_650284.2 WD40 repeat 84..116 CDD:293791
WD40 111..372 CDD:475233 1/5 (20%)
WD40 repeat 162..201 CDD:293791
WD40 198..642 CDD:441893 65/311 (21%)
WD40 repeat 206..242 CDD:293791
WD40 repeat 249..285 CDD:293791
WD40 repeat 291..331 CDD:293791
WD40 repeat 337..364 CDD:293791
WD40 repeat 408..447 CDD:293791 6/45 (13%)
WD40 repeat 458..496 CDD:293791 8/55 (15%)
WD40 repeat 502..540 CDD:293791 10/42 (24%)
WD40 repeat 545..580 CDD:293791 4/34 (12%)
WD40 repeat 587..622 CDD:293791 11/40 (28%)
Utp21 717..918 CDD:461219
Blue background indicates that the domain is not in the aligned region.

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