DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and AT1G18610

DIOPT Version :10

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_173296.3 Gene:AT1G18610 / 838442 AraportID:AT1G18610 Length:556 Species:Arabidopsis thaliana


Alignment Length:441 Identity:96/441 - (21%)
Similarity:144/441 - (32%) Gaps:146/441 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 PLARSGH--RIIASNSHLYSLGGYNPRSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAAN 262
            |..|.||  ..|...|.||..|||...:..:...|          .::.|.:.|...:.  |...
plant    22 PGKRWGHTCNAIKGGSFLYVFGGYGRDNCQTNQVH----------VFDAAKQIWTQPMI--NGTP 74

  Fly   263 MPVELASNALTIHNNVLISHGGTGYPFGVSCSNDCYVYRTASAGATPGVDRLQVKGDLPTAQYGP 327
            .|...:.:..|:.:|                                                  
plant    75 PPPRDSHSCTTVGDN-------------------------------------------------- 89

  Fly   328 GIVIHKHFLYTIGGTTGFDYTCDVYRLDLRTGIWENVYISRPEMR-DDPEGRYRHEVVYDGKHIF 391
                    |:..|||.|.:...|:|.||..:..|:     .|.:| :.||.|..|.....||.:|
plant    90 --------LFVFGGTDGVNPLKDLYILDTSSHTWK-----CPSVRGEGPEAREGHSATLVGKRLF 141

  Fly   392 VLGG-----GTSHSVYDLQRIPAYNLEANCWDYFETYPDQRAADADDGNRGYPKPRKCFSCVQHQ 451
            |.||     |.:..:| ...:..:|.|...|        :||...  ||.  |..|...||    
plant   142 VFGGCGKSSGINEEIY-YNDVYIFNTETFVW--------KRAVTI--GNP--PSARDSHSC---- 189

  Fly   452 SSTGDIEAFITGGLQG-DFSTYFSDIWKLNLRTKHWYRIETA---ILPRPLYFHSAAH---SDNG 509
             |:...:..:.||..| |:  |.||:..|:..|..|..:.|:   :.||      |.|   |...
plant   190 -SSWKNKLVVIGGEDGHDY--YLSDVHILDTDTLIWKELNTSGQLLTPR------AGHVTVSLGR 245

  Fly   510 CMYVFGGIEYIDKEMRRRNDLYKM------WMTVPKLSE----------MCWD--------AITY 550
            ..:||||  :.|.: ...:|||.:      |..|..:.|          .|.|        .:..
plant   246 NFFVFGG--FTDAQ-NLYDDLYVLDVDTCIWSKVLTMGEGPSARFSSAGACLDPHKAGFLVIVGG 307

  Fly   551 YNDNLDLYDRKTLLEAGI--PKRFTERLPP-QRRRRLDTSQPDPSMLISLY 598
            .|.||:..|....|:.|:  ..||.:.:.. ..:::|.....:.|...|||
plant   308 CNKNLEALDDMFYLQTGLGYDARFDQNVGMLSLKKQLKIKCQEQSHASSLY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 NanM 197..516 CDD:442289 72/330 (22%)
KELCH repeat 203..263 CDD:276965 14/61 (23%)
KELCH repeat 267..321 CDD:276965 2/53 (4%)
KELCH repeat 324..364 CDD:276965 10/39 (26%)
KELCH repeat 442..495 CDD:276965 15/56 (27%)
AT1G18610NP_173296.3 NanM 22..311 CDD:442289 84/392 (21%)
KELCH repeat 25..69 CDD:276965 13/53 (25%)
KELCH repeat 78..125 CDD:276965 14/109 (13%)
KELCH repeat 128..173 CDD:276965 13/53 (25%)
KELCH repeat 184..232 CDD:276965 15/54 (28%)
KELCH repeat 235..281 CDD:276965 14/54 (26%)

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