DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slim and Klhdc3

DIOPT Version :9

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001157201.2 Gene:Klhdc3 / 71765 MGIID:2651568 Length:382 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 KELCH repeat 203..263 CDD:276965
KELCH repeat 267..321 CDD:276965
KELCH repeat 324..364 CDD:276965
Kelch_1 325..372 CDD:279660
Kelch_4 441..492 CDD:290154
KELCH repeat 442..495 CDD:276965
Klhdc3NP_001157201.2 KELCH repeat 180..236 CDD:276965
Kelch 4 191..249
KELCH repeat 239..283 CDD:276965
Kelch 5 251..301
KELCH repeat 14..62 CDD:276965
Kelch_6 14..61 CDD:372847
Kelch 1 25..77
PLN02153 74..>318 CDD:177814
KELCH repeat 77..124 CDD:276965
Kelch 2 88..138
KELCH repeat 128..173 CDD:276965
Kelch 3 139..189
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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