DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slim and FBXO42

DIOPT Version :9

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_061867.1 Gene:FBXO42 / 54455 HGNCID:29249 Length:717 Species:Homo sapiens


Alignment Length:341 Identity:80/341 - (23%)
Similarity:129/341 - (37%) Gaps:85/341 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 MDAASDLDEEEEEEDD-----DVDVDVDYGDTDSESEFEEMYSDEWTSSSDELDEGTELSKSVLN 159
            |.::||      .|||     |.:..|..|..|.:.|...:...|.|..:..:   :||.:.||.
Human     1 MASSSD------SEDDSFMAVDQEETVLEGTMDQDEEPHPVLEAEETRHNRSM---SELPEEVLE 56

  Fly   160 VFLS--SDKQQSQMAGQIPMYAFQPLRLVK-----C-------------QYRDKHIP-GGFPLA- 202
            ..||  |..|:.:.|.   :...|..||:|     |             |:..:..| .|.|:. 
Human    57 YILSFLSPYQEHKTAA---LVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPITQ 118

  Fly   203 RSGHR--IIASNSHLYSLGGYNPRSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAANMPV 265
            |..|.  ...:|..:|..||....|..:|        |.:||..:..::.|...|.:|   :.|.
Human   119 RFSHSACYYDANQSMYVFGGCTQSSCNAA--------FNDLWRLDLNSKEWIRPLASG---SYPS 172

  Fly   266 ELASNALTIHNNVLISHGG----TGYP-------FGVSCSNDCYVYRTASAGATPGVD----RLQ 315
            ..|...|.::.::|:..||    :.||       |     ::.:.|       :|..:    .:.
Human   173 PKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFF-----DEIHTY-------SPSKNWWNCIVT 225

  Fly   316 VKGDLPTAQYGPGIVIHKHFLYTIGGTTGF-DYTCDVYRLDLRTGIWENVYISRPEMRDDPEGRY 379
            ..|..|.|.:...::..|..::  ||:.|. ..:.||:.|||....|....||.|.  ..|.|. 
Human   226 THGPPPMAGHSSCVIDDKMIVF--GGSLGSRQMSNDVWVLDLEQWAWSKPNISGPS--PHPRGG- 285

  Fly   380 RHEVVYDGKHIFVLGG 395
            :.::|.|...|.:|||
Human   286 QSQIVIDDATILILGG 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 KELCH repeat 203..263 CDD:276965 14/61 (23%)
KELCH repeat 267..321 CDD:276965 11/68 (16%)
KELCH repeat 324..364 CDD:276965 10/40 (25%)
Kelch_1 325..372 CDD:279660 13/47 (28%)
Kelch_4 441..492 CDD:290154
KELCH repeat 442..495 CDD:276965
FBXO42NP_061867.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 11/38 (29%)
F-box-like 47..>82 CDD:315592 11/40 (28%)
KELCH repeat 119..168 CDD:276965 13/56 (23%)
Kelch_3 130..182 CDD:315978 15/62 (24%)
Kelch 1 132..184 14/62 (23%)
KELCH repeat 174..229 CDD:276965 10/66 (15%)
Kelch_3 183..240 CDD:315978 11/68 (16%)
Kelch 2 186..242 11/67 (16%)
Guanylate_kin 228..>360 CDD:331880 24/79 (30%)
Kelch_5 229..268 CDD:316377 11/40 (28%)
KELCH repeat 232..271 CDD:276965 10/40 (25%)
Kelch 3 244..293 15/53 (28%)
Kelch 4 295..342 4/7 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..474
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..631
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0379
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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