DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and rabepk

DIOPT Version :10

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_001002209.1 Gene:rabepk / 431756 ZFINID:ZDB-GENE-040704-52 Length:351 Species:Danio rerio


Alignment Length:353 Identity:75/353 - (21%)
Similarity:113/353 - (32%) Gaps:129/353 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 YRTASAGATPGVDRLQVKGDLPTAQY------GPGIVIHKHFLYTIGGTTGFDYTCDVYRLDLRT 358
            |.....||.|||........||.|.:      |.|.::      .:||........|.|.::|.|
Zfish    19 YVLEPTGAAPGVSVGHTCSFLPAAHHHDEDGGGKGKIV------IVGGANPSGSFADSYIINLDT 77

  Fly   359 -----GIWENVYI----------SRPE---------------------MRDDPEGR--------- 378
                 ..||.:..          |.|:                     ..|..|||         
Zfish    78 HQWDLPDWEGLQARYEHCSFTPESEPQSLWVFGGAEKSTNRNCVQALRFSDGGEGRRFWQSVQVT 142

  Fly   379 --------YRHEVVYDGKHIFVLGGGT--SHSVYDLQRIPAYNLEANCWDYFETYPDQRAADADD 433
                    |.......|..:||..||.  |.:|.|.| :..::..:..|    |.||        
Zfish   143 GVPPSGRTYHTNSACVGNRLFVFSGGEAGSSAVTDAQ-LHVFDAVSVTW----TQPD-------- 194

  Fly   434 GNRGYPKPRKCFSCVQHQSSTGDIEAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIET-AILPRP 497
             ..|.|..::    ..|..:....:.:|.||:.|:  .:.||::.||..:..|.:::. ..||..
Zfish   195 -TTGTPPAQR----HGHVITAVGSDIYIHGGMSGE--KFHSDMFTLNTESLKWQKVKAKGDLPPG 252

  Fly   498 LYFHSAAHSD---NGCMYVFGGIEYIDKEMRRRNDLYKMWMTVPKLSEMCWDAITYYNDNLDLYD 559
            :    ||||.   |..:::|||:    ......|.::|.     :..:..|              
Zfish   253 V----AAHSSVTFNKNIFIFGGM----TADGATNSMFKF-----QCDKQRW-------------- 290

  Fly   560 RKTLLEAGIPKRFTERLPPQRRRRLDTS 587
              |||      :|...|||   .|||.|
Zfish   291 --TLL------KFEGDLPP---GRLDHS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 NanM 197..516 CDD:442289 59/280 (21%)
KELCH repeat 203..263 CDD:276965
KELCH repeat 267..321 CDD:276965 6/20 (30%)
KELCH repeat 324..364 CDD:276965 10/50 (20%)
KELCH repeat 442..495 CDD:276965 10/53 (19%)
rabepkNP_001002209.1 NanM 39..276 CDD:442289 55/270 (20%)
Kelch 1 54..102 8/53 (15%)
Kelch 2 105..156 5/50 (10%)
KELCH repeat 149..199 CDD:276965 15/63 (24%)
Kelch 3 162..210 15/65 (23%)
KELCH repeat 203..250 CDD:276965 10/52 (19%)
Kelch 4 214..263 15/54 (28%)
KELCH repeat 253..293 CDD:276965 12/68 (18%)
Kelch_3 262..311 CDD:433188 18/80 (23%)
Kelch 5 264..313 17/78 (22%)
Kelch 6 328..351
Blue background indicates that the domain is not in the aligned region.

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