DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and klhdc10

DIOPT Version :9

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_005164752.1 Gene:klhdc10 / 393231 ZFINID:ZDB-GENE-040426-776 Length:424 Species:Danio rerio


Alignment Length:449 Identity:173/449 - (38%)
Similarity:240/449 - (53%) Gaps:40/449 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 MYSDEWTSSSDELDEGTELS-KSVLNVFLSSDKQQSQMAGQIPMYAFQPLRLVKCQYRDKHIPGG 198
            |:..|...|.|.|::...|| :..|....|..:.....|.:|..:....||:.....|:.|   .
Zfish     8 MFGAEGAHSPDRLNQFERLSGRPPLRAAGSKKRVSWLQARRIFGHPSPSLRIPNRFLREGH---R 69

  Fly   199 FPLARSGHRIIASNSHLYSLGGYNP-RSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAAN 262
            .|.||||||.:|.|::||..||||| ......|.:....||:|||.::|||.||:.....|   .
Zfish    70 APPARSGHRCVADNTNLYVFGGYNPDYDESGGSENEDYPLFRELWRFHFATGTWQQIRTEG---F 131

  Fly   263 MPVELASNALTIHNNVLISHGGTGYPFGVSCSNDCYV----YRTASAGATPGVDRLQVKGDLPTA 323
            ||.||||.:..:|.|.|:..||||.|||.:..||.:|    |:..|.        |..:|..|..
Zfish   132 MPTELASMSAVLHGNNLLVFGGTGIPFGENNGNDVHVCNVKYKRWSL--------LNCRGKKPNR 188

  Fly   324 QYGPGIVIHKHFLYTIGGTTGFDYTCDVYRLDLRTGIWENVYISRPEMRDD-PEGRYRHEVVYDG 387
            .||..:.|...|||..|||||:.|:.|::||||.|..|.::..:.|.  || ||.|||||:.:||
Zfish   189 IYGQAMAIISGFLYVFGGTTGYIYSTDLHRLDLTTREWIHLKPNNPP--DDLPEERYRHEIAHDG 251

  Fly   388 KHIFVLGGGTSHSVYDLQRIPAYNLEANCWDYFETYPDQRAADADDGNRGYPKPRKCFSCVQHQS 452
            :.|::||||||.:.|.|.:|.|||||.|.|:...|.|.:|.        |||.||:|.||||.::
Zfish   252 QRIYILGGGTSWTSYPLDKIHAYNLETNSWEEITTKPHERI--------GYPAPRRCHSCVQIKN 308

  Fly   453 STGDIEAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIETAILPRPLYFHSAAHSDNGCMYVFGGI 517
                 :.||.||..|:  ....|:||:||:|..|::: .|::|.|.|||.||.:..||||:.||:
Zfish   309 -----DVFICGGYNGE--VILDDLWKVNLQTFQWHKL-PAVMPEPAYFHCAAVTPAGCMYIHGGV 365

  Fly   518 EYIDKEMRRRNDLYKMWMTVPKLSEMCWDAITYYNDNLDLYDRKTLLEAGIPKRFTERL 576
            ..| .|.:|...|:|:|:.||.|.|:||:.:.....:|.......||..|:.:...|||
Zfish   366 VNI-HENKRTGSLFKIWLVVPSLLELCWERLLKAFPHLAQLTPIQLLNLGLTQELIERL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 KELCH repeat 203..263 CDD:276965 26/60 (43%)
KELCH repeat 267..321 CDD:276965 20/57 (35%)
KELCH repeat 324..364 CDD:276965 19/39 (49%)
Kelch_1 325..372 CDD:279660 20/46 (43%)
Kelch_4 441..492 CDD:290154 19/50 (38%)
KELCH repeat 442..495 CDD:276965 19/52 (37%)
klhdc10XP_005164752.1 PLN02153 65..378 CDD:177814 144/345 (42%)
Kelch_4 73..126 CDD:290154 26/52 (50%)
KELCH repeat 74..132 CDD:276965 26/60 (43%)
KELCH repeat 136..186 CDD:276965 20/57 (35%)
Kelch_4 188..226 CDD:290154 18/37 (49%)
KELCH repeat 190..238 CDD:276965 21/49 (43%)
KELCH repeat 242..295 CDD:276965 28/60 (47%)
Kelch_1 242..288 CDD:279660 25/45 (56%)
Kelch_1 297..339 CDD:279660 19/49 (39%)
KELCH repeat 298..344 CDD:276965 19/53 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I10007
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15267
Inparanoid 1 1.050 276 1.000 Inparanoid score I2917
OMA 1 1.010 - - QHG49432
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007461
OrthoInspector 1 1.000 - - oto41395
orthoMCL 1 0.900 - - OOG6_106219
Panther 1 1.100 - - LDO PTHR46428
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4153
SonicParanoid 1 1.000 - - X5591
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.960

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