DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and Klhdc10

DIOPT Version :9

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_038963443.1 Gene:Klhdc10 / 312199 RGDID:1309792 Length:454 Species:Rattus norvegicus


Alignment Length:395 Identity:158/395 - (40%)
Similarity:215/395 - (54%) Gaps:41/395 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 QYRDKHIPGGFPLARSGHRIIASNSHLYSLGGYNPRSAMSASRHGRCL-LFQELWSYNFATRTWR 252
            :|...|.|   |.||||||.:|.|::||..|||||....|........ ||:|||.|:|||..|.
  Rat    93 KYCTGHRP---PPARSGHRCVADNTNLYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGVWH 154

  Fly   253 LELNAGNAANMPVELASNALTIHNNVLISHGGTGYPFGVSCSNDCYV----YRTASAGATPGVDR 313
               ..|....||.||||.:|.:|.|.|:..||||.|||.|..||.:|    |:..:.        
  Rat   155 ---QMGTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRWAL-------- 208

  Fly   314 LQVKGDLPTAQYGPGIVIHKHFLYTIGGTTGFDYTCDVYRLDLRTGIWENVYISRPE--MRDDPE 376
            |..:|..|:..||..:.:....||..|||||:.|:.|:::|||.|.:|..:   :|.  ..|.||
  Rat   209 LSCRGKRPSRIYGQAMALINGSLYVFGGTTGYIYSTDLHKLDLNTMVWTQL---KPNNLSCDLPE 270

  Fly   377 GRYRHEVVYDGKHIFVLGGGTSHSVYDLQRIPAYNLEANCWDYFETYPDQRAADADDGNRGYPKP 441
            .|||||:.:||:.|::||||||.:.|.|.:|.|||||.|.|:...|.|.::.        |:|..
  Rat   271 ERYRHEIAHDGQRIYILGGGTSWTAYSLNKIHAYNLETNAWEEIATKPHEKI--------GFPAA 327

  Fly   442 RKCFSCVQHQSSTGDIEAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIETAILPRPLYFHSAAHS 506
            |:|.||||.::     :.||.||..|:  ....|||||||:|..|.:: .|.:|.|:|||.||.:
  Rat   328 RRCHSCVQIKN-----DVFICGGYNGE--VILGDIWKLNLQTFQWVKL-PATMPEPVYFHCAAVT 384

  Fly   507 DNGCMYVFGGIEYIDKEMRRRNDLYKMWMTVPKLSEMCWDAITYYNDNLDLYDRKTLLEAGIPKR 571
            ..||||:.||:..| .|.:|...|:|:|:.||.|.|:.|:.:.....||....|..||..|:.:.
  Rat   385 PAGCMYIHGGVVNI-HENKRTGSLFKIWLVVPSLLELAWEKLLAAFPNLANLSRTQLLHLGLTQE 448

  Fly   572 FTERL 576
            ..|||
  Rat   449 LIERL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 KELCH repeat 203..263 CDD:276965 26/60 (43%)
KELCH repeat 267..321 CDD:276965 21/57 (37%)
KELCH repeat 324..364 CDD:276965 16/39 (41%)
Kelch_1 325..372 CDD:279660 17/48 (35%)
Kelch_4 441..492 CDD:290154 20/50 (40%)
KELCH repeat 442..495 CDD:276965 21/52 (40%)
Klhdc10XP_038963443.1 PRK14131 100..>183 CDD:237617 39/88 (44%)
KELCH repeat 104..162 CDD:276965 26/60 (43%)
PLN02153 151..>314 CDD:177814 71/176 (40%)
KELCH repeat 166..216 CDD:276965 21/57 (37%)
KELCH repeat 220..268 CDD:276965 17/50 (34%)
KELCH repeat 272..325 CDD:276965 27/60 (45%)
Kelch_1 327..373 CDD:396078 21/53 (40%)
KELCH repeat 328..374 CDD:276965 21/53 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 65 1.000 Domainoid score I9858
eggNOG 1 0.900 - - E1_KOG0379
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H15267
Inparanoid 1 1.050 272 1.000 Inparanoid score I2915
OMA 1 1.010 - - QHG49432
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007461
OrthoInspector 1 1.000 - - oto97395
orthoMCL 1 0.900 - - OOG6_106219
Panther 1 1.100 - - LDO PTHR46428
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5591
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.870

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