DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and Fbxo42

DIOPT Version :10

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:NP_766106.2 Gene:Fbxo42 / 213499 MGIID:1924992 Length:717 Species:Mus musculus


Alignment Length:342 Identity:81/342 - (23%)
Similarity:132/342 - (38%) Gaps:87/342 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 MDAASDLDEEEEEEDDDVDVDVDYGDTDSESEFEEMYSDEWTSSSDELDEG------TELSKSVL 158
            |.::||      .|||.| :.||..:|..|...|:   ||......|::|.      :||.:.||
Mouse     1 MASSSD------SEDDSV-MAVDQEETALEGTMEQ---DEDPHPVLEVEETRHNRSMSELPEEVL 55

  Fly   159 NVFLS--SDKQQSQMAGQIPMYAFQPLRLVK-----C-------------QYRDKHIP-GGFPLA 202
            ...||  |..|:.:.|.   :...|..||:|     |             |:..:..| .|.|:.
Mouse    56 EYILSFLSPYQEHKTAA---LVCKQWYRLIKGVAHQCYHGFMKAVQEGNIQWESRTYPYPGTPIT 117

  Fly   203 -RSGHR--IIASNSHLYSLGGYNPRSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAANMP 264
             |..|.  ...:|..:|..||....|..:|        |.:||..:..::.|...|.:|   :.|
Mouse   118 QRFSHSACYYDANQSMYVFGGCTQSSCNAA--------FNDLWRLDLNSKEWIRPLASG---SYP 171

  Fly   265 VELASNALTIHNNVLISHGG----TGYP-------FGVSCSNDCYVYRTASAGATPGVD----RL 314
            ...|...|.::.::|:..||    :.||       |     ::.:.|       :|..:    .:
Mouse   172 SPKAGATLVVYKDLLVLFGGWTRPSPYPLHQPERFF-----DEIHTY-------SPSKNWWNCIV 224

  Fly   315 QVKGDLPTAQYGPGIVIHKHFLYTIGGTTGF-DYTCDVYRLDLRTGIWENVYISRPEMRDDPEGR 378
            ...|..|.|.:...::..|..::  ||:.|. ..:.:|:.|||....|....||.|.  ..|.|.
Mouse   225 TTHGPPPMAGHSSCVIGDKMIVF--GGSLGSRQMSNEVWVLDLEQWAWSKPNISGPS--PHPRGG 285

  Fly   379 YRHEVVYDGKHIFVLGG 395
             :.::|.|...:.:|||
Mouse   286 -QSQIVIDDTTLLILGG 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 NanM 197..516 CDD:442289 49/218 (22%)
KELCH repeat 203..263 CDD:276965 14/61 (23%)
KELCH repeat 267..321 CDD:276965 11/68 (16%)
KELCH repeat 324..364 CDD:276965 9/40 (23%)
KELCH repeat 442..495 CDD:276965
Fbxo42NP_766106.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 14/42 (33%)
F-box_FBXO42 47..84 CDD:438882 12/39 (31%)
NanM 110..>321 CDD:442289 50/220 (23%)
KELCH repeat 119..168 CDD:276965 13/56 (23%)
Kelch 1 132..184 14/62 (23%)
KELCH repeat 174..229 CDD:276965 10/66 (15%)
Kelch 2 186..242 11/67 (16%)
KELCH repeat 232..271 CDD:276965 9/40 (23%)
Kelch 3 244..293 14/53 (26%)
Kelch 4 295..342 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..452
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 570..632
Blue background indicates that the domain is not in the aligned region.

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