DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and Hcf

DIOPT Version :10

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_061507156.1 Gene:Hcf / 1278452 VectorBaseID:AGAMI1_010556 Length:1952 Species:Anopheles gambiae


Alignment Length:379 Identity:83/379 - (21%)
Similarity:117/379 - (30%) Gaps:115/379 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 GGFPLARSGHRIIASNSHLYSLGGYNPRSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAA 261
            |..|..|.|||.:.....:...||.|..            :..||..||.||..|          
Mosquito    34 GPQPRPRHGHRSVNIKELMVVFGGGNEG------------IVDELHVYNTATNQW---------- 76

  Fly   262 NMPVELASNALTIHNNVLISHGGTGYPFGVSCSNDCYVYRTASAGATPGVDRLQVKGDLPTAQYG 326
                                                ||..|              |||:|.....
Mosquito    77 ------------------------------------YVPAT--------------KGDVPPGCAA 91

  Fly   327 PGIVIHKHFLYTIGGTTGF-DYTCDVYRLDLRTGIWENVYISRPEMRDDPEGRYRHEVVYDGKHI 390
            .|.|:....:...||...: .|:.::|.|......|:.:....||....|..|..|.....|..|
Mosquito    92 YGFVVDGTRILVFGGMVEYGKYSNELYELQATKWEWKKLRPKPPESGPPPCRRLGHSFTLVGDKI 156

  Fly   391 FVLGGGTSHSVYDLQRIPAY-------NLEAN--CWDYFETYPDQRAADADDGNRGYPKPRKCFS 446
            ::.||..:.|......||.|       .::.|  .|:...|:.:.            |.||:..:
Mosquito   157 YLFGGLANESDDPKNNIPKYLNDLYILEIKNNQLQWEIPTTFGES------------PPPRESHT 209

  Fly   447 CVQ-HQSSTGDIEAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIETA-ILPRPLYFHSAAHSDNG 509
            .|. :..........|.||:.|   ....|:|.|:..|..|.|..|: .||.|...||:....|.
Mosquito   210 AVSWYDKKQKKFWLVIYGGMSG---CRLGDLWLLDTDTMSWTRPRTSGPLPLPRSLHSSTLIGNR 271

  Fly   510 CMYVFGG----------IEYIDKEMRRRNDLYKMWMTVPKLSEMCWDAITYYND 553
             ||||||          :|..:||.:..|.|..:     .|..|.|:.:....|
Mosquito   272 -MYVFGGWVPLVLDDVKVEKHEKEWKCTNTLACL-----NLETMTWEELDLDTD 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 NanM 197..516 CDD:442289 72/330 (22%)
KELCH repeat 203..263 CDD:276965 14/59 (24%)
KELCH repeat 267..321 CDD:276965 6/53 (11%)
KELCH repeat 324..364 CDD:276965 8/40 (20%)
KELCH repeat 442..495 CDD:276965 13/54 (24%)
HcfXP_061507156.1 None

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