DRSC/TRiP Functional Genomics Resources

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Protein Alignment slim and KLHDC3

DIOPT Version :9

Sequence 1:NP_523782.1 Gene:slim / 37121 FlyBaseID:FBgn0261477 Length:609 Species:Drosophila melanogaster
Sequence 2:XP_024302088.1 Gene:KLHDC3 / 116138 HGNCID:20704 Length:395 Species:Homo sapiens


Alignment Length:438 Identity:86/438 - (19%)
Similarity:135/438 - (30%) Gaps:170/438 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 LSKSVLNVFLSSDK---QQSQMAGQIPMYAFQPLRLVKCQYRDKHIPGGFPLARSGHRIIASNSH 214
            ||::|..|.|...|   .:|.:.||.|:                     .|..|.||..:..:..
Human    58 LSRAVPTVSLRWTKLPPVKSAIRGQAPV---------------------VPYMRYGHSTVLIDDT 101

  Fly   215 LYSLGGYNPRSAMSASRHGRCLLFQELWSYNFATRTWRLELNAGNAANMPVELASNALTIHNNVL 279
            :...||.|       ...|.|   ..|::::..|..|                            
Human   102 VLLWGGRN-------DTEGAC---NVLYAFDVNTHKW---------------------------- 128

  Fly   280 ISHGGTGYPFGVSCSNDCYVYRTASAGATPGVDRLQVKGDLPTAQYGPGIVIHKHFLYTIGGTTG 344
                                       .||     :|.|.:|.|:.|....:....:|..|   |
Human   129 ---------------------------FTP-----RVSGTVPGARDGHSACVLGKIMYIFG---G 158

  Fly   345 FD-----YTCDVYRLDLRTGIWENVYISRPEMRDDPEGRYR--HEVVYDGKHIFVLGG-----GT 397
            ::     ::.|:::||..|..|..:.     .:..| .|:|  |.....|.|::|.||     |.
Human   159 YEQQADCFSNDIHKLDTSTMTWTLIC-----TKGSP-ARWRDFHSATMLGSHMYVFGGRADRFGP 217

  Fly   398 SHSVYDL--QRIPAYNLEANCW-DYFET--YPDQRAADADDGNRGYPKPRKCFSCVQHQSSTGDI 457
            .||..::  .||..::.....| |...|  .|:.|.:.:..|..|                    
Human   218 FHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAFGYNG-------------------- 262

  Fly   458 EAFITGGLQGDFSTYFSDIWKLNLRTKHWYRIETAILPRPLYFHSAAHSDNGCMYV------FGG 516
            |.:|.||.....:.:|.|:||.|..:..|.:||      |............|..|      |||
Human   263 ELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIE------PKGKGPCPRRRQCCCIVGDKIVLFGG 321

  Fly   517 ------------IEYIDKEMRRRNDLYKMWMTVPKLSEMCWDAITYYN 552
                        .:.||     .:||:.:..: |.|..:|..|:..||
Human   322 TSPSPEEGLGDEFDLID-----HSDLHILDFS-PSLKTLCKLAVIQYN 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slimNP_523782.1 KELCH repeat 203..263 CDD:276965 11/59 (19%)
KELCH repeat 267..321 CDD:276965 4/53 (8%)
KELCH repeat 324..364 CDD:276965 9/44 (20%)
Kelch_1 325..372 CDD:279660 9/51 (18%)
Kelch_4 441..492 CDD:290154 12/50 (24%)
KELCH repeat 442..495 CDD:276965 12/52 (23%)
KLHDC3XP_024302088.1 PLN02193 63..>331 CDD:330882 73/393 (19%)
KELCH repeat 90..135 CDD:276965 14/114 (12%)
KELCH repeat 141..186 CDD:276965 9/52 (17%)
KELCH repeat 193..249 CDD:276965 15/55 (27%)
KELCH repeat 252..296 CDD:276965 15/69 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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