DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-O and pign-1

DIOPT Version :9

Sequence 1:NP_611332.1 Gene:PIG-O / 37118 FlyBaseID:FBgn0034346 Length:1077 Species:Drosophila melanogaster
Sequence 2:NP_001249296.1 Gene:pign-1 / 171881 WormBaseID:WBGene00021840 Length:912 Species:Caenorhabditis elegans


Alignment Length:1012 Identity:205/1012 - (20%)
Similarity:353/1012 - (34%) Gaps:325/1012 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 PQKSKVIVLVVDALKYE-FGLYRANATDPLPYENKLVVLQELLQQNPDHARLMRFRADPPTTTLQ 137
            |.| ::.::..|.|:|: |..|    .|..||      |..::.:.                  :
 Worm    44 PAK-RIFIISADGLRYDTFNKY----PDKSPY------LHSIMNER------------------K 79

  Fly   138 RLKGLTTGSLPTFIDIGSNFASPEINEDNIIDQIVK--NDLPVVFLGDS-------TWT------ 187
            .:.||:...:||....|.......|.||  |..:.|  ...||.|  ||       :|.      
 Worm    80 GIYGLSRSHIPTESRPGHVAIFAGITED--ISAVAKGWKKNPVQF--DSVFNRSSYSWMWGSPDI 140

  Fly   188 ----DLYPHRFKRSYSYPSFDIF--DLDSVDNEILKHLPKELES------------KDWQVLVAH 234
                |..|:....|||....|..  |..::|..:.:|....||:            :...:...|
 Worm   141 VNLFDDLPNAESFSYSADEEDFASKDASNLDKWVFEHFENFLETAKTDEALNDKMREQKSIFFLH 205

  Fly   235 FLGVDHCGHKHGPMHEEMARKLGEMN---EVIRSVVAAM--DNDTTLLVMGDHGMTASGDHGGDT 294
            .||:|..||.:.||..:....:..::   |.::.:|.|.  |:.|..|...|||||..|.||..:
 Worm   206 LLGIDTNGHGNKPMSRQYIDNIKVVDSGIEKVQHLVDAFFGDHKTAWLFTSDHGMTDWGSHGAGS 270

  Fly   295 DDETNALLFAYSKQHRFYGNDSGSDSEMLQQIDLVPTLATILGVPIPYSNLGLVNFNIVP----- 354
            |||......|:..     |...|.....|.||||.|.::.::|.|||.:::|::...::.     
 Worm   271 DDEVLTPFVAWGA-----GVKQGGPKLDLNQIDLAPLISALIGCPIPVNSMGILPVQMMNSKGSS 330

  Fly   355 -DLRVPHLN----KFQTLLLHSWQNAQQIYRYFFQY---ALENKRT----------FNV-----E 396
             :.:....|    |.|.:.|.:.::.:..:|.|.::   |:|:.||          |:|     .
 Worm   331 YEFKAIEANFKQLKEQIIFLKNAKSRRLWFRQFEKFGDKAMESLRTTLAQLGRDRRFSVATSLFA 395

  Fly   397 QMDHLETEFILLTHRVQTVYNEVAFKSFVRDLNTNLRDILG---TCREI-WVRFDPTQMSQGLLF 457
            ...||..|.|:..||..                   |.:||   :|..: |:         .|:.
 Worm   396 DNAHLMKEAIVFYHRYD-------------------RQMLGAAVSCSFVAWI---------ALVV 432

  Fly   458 TFLPLFFIFLVVNNSRPAD-----FPHIFKAKEVFYVYLINLAAGVFGYRYFKTFSFKTEEQGVI 517
            :||         :||...:     .||        ::::|.||..                   :
 Worm   433 SFL---------HNSTSKENLSLLVPH--------HLFIIPLACS-------------------L 461

  Fly   518 FFTAISSA-------VILAFHTLRHWTSIATNWSA--------VKRFGHMPTRLLLFGSMAVF-- 565
            .|||..|.       :||..:.:    ||..|.|.        ||.....|..|....|:.||  
 Worm   462 LFTAYCSLSMTQTIYIILPIYLI----SILENHSKLTQRIREHVKALSAQPDWLNKVLSVEVFVK 522

  Fly   566 -------FSNSFVIQEAKILSYL----LAAAILLL-------SHELLRLSARLDFRTKFKASQFL 612
                   ||.:..|   .:|:::    |||..:||       ||.::               .:.
 Worm   523 PFLGFVGFSITICI---FVLTFMDRAFLAAVFVLLMALPQFYSHPIV---------------SYW 569

  Fly   613 RSTALRLIL-------------ASVLAICLIRFAYTLFRC-REEQGNCSDFVNTGGAGFSLKKPG 663
            ..|.|.|.|             ::.:.:|::....|.|.| |..:.:|                 
 Worm   570 SKTWLTLCLVLCIFPFLPAVGVSTHIPLCILSPIITAFLCHRLSRRSC----------------- 617

  Fly   664 TGKTYILAVVVLVVYTTLTRLYLRSCGN-------LTGNLPNVLLARYGPTV--ASICAGGHILL 719
              .|.|..::.|::|......::.:..|       .|.|....|| ...||.  .|:.|.|.|..
 Worm   618 --LTRIQRMLELMIYVQSATAFMIAVVNYGFEKFAATVNCSMDLL-DLNPTFCDCSVVAHGSISC 679

  Fly   720 ANSSIKHIQRTHIDAMALVIYGLLLV---QIIVLSWAPLMTFVLPPRSSHTVTINGNESIVPEIF 781
            .:|   :..|..:....:|.|.||.:   .:.:|.:..|:|..:.....|...:.     :.::.
 Worm   680 GSS---NCIRLMLLCEKIVPYSLLSISYESLFMLIFLVLLTLFVRFEFGHLSDVE-----LLQLK 736

  Fly   782 RKMKRMYEGDDDE-RRSHIPVVYGLATVY-------------SSIVIAFGVFLALVMIVLLEPRA 832
            ....::..|:..| ||:.:.|.:.|..::             |::.:...||....|.:||..:.
 Worm   737 VDSTKISTGEYVELRRTVVCVSFVLCPLFGTGNFASINSFNPSTLNLFISVFSPFTMAILLILKL 801

  Fly   833 SIGLVVCVAVGAILLSVHSILRYRTATSFESCVQPTFTALVGWFLLAHFCFFATSHQTTLSQIEW 897
            .|.:::..:..|      ||:|:...:....|   .|:.:...|:  ..|||        .|:..
 Worm   802 LIPILLVTSAFA------SIVRFDQESIQRLC---CFSLIFTDFM--SMCFF--------HQLRD 847

  Fly   898 RAAFVGRTTGIGQ---SNLVSGALVILNTFCGPIFFF 931
            ..:::.....|.|   |..:|.||::|.:....:..|
 Worm   848 EGSWLDIGMSISQFIVSMCISLALLLLLSISSHLMAF 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ONP_611332.1 GPI_EPT_3 74..349 CDD:293747 77/313 (25%)
pign-1NP_001249296.1 GPI_EPT_1 42..320 CDD:293744 77/313 (25%)
PigN 404..850 CDD:368221 105/578 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.