DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5174 and Tpd52l2

DIOPT Version :9

Sequence 1:NP_001246407.1 Gene:CG5174 / 37117 FlyBaseID:FBgn0034345 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_038960625.1 Gene:Tpd52l2 / 296480 RGDID:735167 Length:230 Species:Rattus norvegicus


Alignment Length:238 Identity:70/238 - (29%)
Similarity:119/238 - (50%) Gaps:27/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 DNYKRFLNIGHRSRGTKFDNTANLSEPASPANSVASAEIAAEFAALSVEEKEQRRAEWSQELARV 197
            |:..:.:|:...::|...|...::  |..|  .|.....|.|  .|:..|:|:.||    |||:|
  Rat     2 DSASQDINLNSPNKGVLSDFMTDV--PVDP--GVVHRTPAVE--GLTEVEEEELRA----ELAKV 56

  Fly   198 EEEINTLRTVLASKTRHASDLKRKLGITVWKEVTDDVNQGLKNLKESTVYQSVEQSVGTFTKTVY 262
            ||||.|||.|||:|.||..:|||:||::...|:..::::...:::.||.|....:.:|.:.:.|.
  Rat    57 EEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQGSTAYVKTSEKLGEWNEKVT 121

  Fly   263 EAPLYQRTESVLKSTGEKTASVFGSITSGISSKLSQMKNSESMRSIEASVGSAYENVKVSYEHNN 327
            ::.||::|:..|...|:||::...::.|.||.||..|:    ......|..|:|     |..|  
  Rat   122 QSDLYKKTQETLSQAGQKTSAALSTMGSAISRKLGDMR----AHPFSQSFSSSY-----SIRH-- 175

  Fly   328 FMCQSHATKVTSRSGSVSSFPDALD--ENNTSSGLNSPTDSLP 368
                |.:..|...|.:..||.|.:.  ::....|..:.:|:||
  Rat   176 ----SISMPVMRNSATFKSFEDRVGTIKSKVVGGRENGSDTLP 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5174NP_001246407.1 TPD52 158..314 CDD:282107 52/155 (34%)
Tpd52l2XP_038960625.1 TPD52 <55..221 CDD:398052 53/175 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339976
Domainoid 1 1.000 57 1.000 Domainoid score I10700
eggNOG 1 0.900 - - E1_KOG4010
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 91 1.000 Inparanoid score I5011
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1225782at2759
OrthoFinder 1 1.000 - - FOG0000981
OrthoInspector 1 1.000 - - otm45779
orthoMCL 1 0.900 - - OOG6_107924
Panther 1 1.100 - - LDO PTHR19307
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5007
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.800

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