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Protein Alignment CG5174 and Tpd52
DIOPT Version :9
Sequence 1: | NP_001246407.1 |
Gene: | CG5174 / 37117 |
FlyBaseID: | FBgn0034345 |
Length: | 369 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038957887.1 |
Gene: | Tpd52 / 294900 |
RGDID: | 1306767 |
Length: | 362 |
Species: | Rattus norvegicus |
Alignment Length: | 161 |
Identity: | 55/161 - (34%) |
Similarity: | 86/161 - (53%) |
Gaps: | 30/161 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 157 SEPASPANSVASAEIAAEFAALSVEEKEQRRAEWSQELARVEEEINTLRTVLASKTRHASDLKRK 221
:||.:.....|.|.::|. ..|:.||:|:.| :||.:|||||.||..|||:|.:|.:::|||
Rat 165 TEPVAEEGEDAVAMLSAP-ETLTEEEQEELR----RELTKVEEEIQTLSQVLAAKEKHLAEIKRK 224
Fly 222 LGITVWKEVTDDVNQGLKNLKESTVYQSVEQSVGTFTKTVYEAPLYQRTESVLKSTGEKTASVFG 286
||||..:|...::.:| :|.| |.|.. |::|...|...|:|.::.|.
Rat 225 LGITSLQEFKQNIAKG---------WQDV-----TATNA------YKKTSETLSQAGQKASAAFS 269
Fly 287 SITSGISSKLSQMK-----NSESMRSIEASV 312
|:.|.|:.||..:| :|.|:|||:.|:
Rat 270 SVGSVITKKLEDVKLQAFSHSFSIRSIQHSI 300
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG5174 | NP_001246407.1 |
TPD52 |
158..314 |
CDD:282107 |
55/160 (34%) |
Tpd52 | XP_038957887.1 |
TPD52 |
<198..330 |
CDD:398052 |
43/123 (35%) |
Information from Original Tools:
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