DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp1 and hdlbpa

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_958882.2 Gene:hdlbpa / 794178 ZFINID:ZDB-GENE-030131-2032 Length:1272 Species:Danio rerio


Alignment Length:1316 Identity:591/1316 - (44%)
Similarity:868/1316 - (65%) Gaps:62/1316 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQAAAVMEETNNATTIEQQPIALINGQEQVANEQQPSS-PTSVATPTSTTSGGTGNATPAFSYDD 64
            |.:.||:.:    .:..:....|:..|.:.|....||| ....:.||               |.|
Zfish     1 MSSVAVLTQ----ESFNEHRSGLLPEQVKAAAGGDPSSVEDDDSLPT---------------YKD 46

  Fly    65 LFPALPAN---TSAQSQSGASGSTLARVTSSQKTHIVHVPCKERKSTESEKFGEGESKRICQQIT 126
            .||.||..   ...|....|..:.:..:.||..|.:.|||.:|||..:..:||||:..::|..|.
Zfish    47 AFPPLPEKPLPEGVQETENAWTTKIKPLKSSIITQVFHVPLEERKYKDMNQFGEGDQAKVCLDIM 111

  Fly   127 KETGAQIEIVSGKNQSLTFLIKGKQSELLDARRKILMGFSTQASRQVTVPREHFRVILGKGGQRL 191
            .:|||.:|:...|:|.|:.::.||...::.||::|:....||||..|.:|:||.|.::||.|::|
Zfish   112 HKTGAHLELSMAKDQGLSIMVSGKYDAVMKARKEIVSRLQTQASATVAIPKEHHRFVIGKSGEKL 176

  Fly   192 REIERVTATRINIPSQSDESEFITIAGTKEGIAQAEQEIRQLSAEQYKKSSDRITVPKVYHPFIV 256
            :|:|..|||:|.||...|.|..|.|:|||||:.:|:.||..:||||.|::.:|:.:.||:||||.
Zfish   177 QELELKTATKIQIPRPDDPSNQIKISGTKEGLEKAKHEILLISAEQDKRAVERMNIDKVFHPFIT 241

  Fly   257 GPYSENLNKLQEETGARINVPPQQVQKDEIVISGEKDAVAAAKAKVEAIYKDMEKKCSTVSVEVA 321
            |.:.:.:..|.:||||||||||..|.|.||||:|||:.||.|..|::.:|::.:|..:|::|||.
Zfish   242 GAHGKLVGDLMQETGARINVPPPSVNKTEIVITGEKEQVALAMVKIKKLYEEKKKNATTIAVEVK 306

  Fly   322 KPKHRYVIGPKGSTIAEILQLTGVSVEMPPNDSPSETITLRGPQVALGNALTVVYQKSNSVKSVE 386
            |.:|:|||||||:|:.|||:.||||||:||.||.|||:.|||....||.|||.||.|:||.....
Zfish   307 KSQHKYVIGPKGNTLQEILERTGVSVEIPPLDSSSETVILRGEPARLGQALTEVYAKANSYTVSS 371

  Fly   387 INAAHWIHKYVIGRKGANMKQLEEDCPNVNVNCL--EDKIKLEGDPENVDRAVAYLSEIIKNYEE 449
            ::|..|:|:::||:||.|:.::.:..|.|::...  ||||.|||..::|......:..|:.:...
Zfish   372 VSAPSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPTKDVQIVQGQIEVIVTDLVS 436

  Fly   450 NFTFEVMTVNPSYYKHIIGKAGANVNRLKDELKVNINI-EEREGQNNIRIEGPKEGVRQAQLELQ 513
            ...:..::|:|.:::|:|||.|||:||:|:..||::.| .:.|..|.|||||..:||::|:.||.
Zfish   437 RMDYTEISVDPKFHRHLIGKGGANINRIKELHKVSVRIPPDNEKSNLIRIEGDPQGVQEAKKELL 501

  Fly   514 EKIDKLENEKSKDVIIDRRLHRSIIGAKGEKIREVKDRYRQVTITIPTPQENTDIVKLRGPKEDV 578
            |...::|||::||:||::|.||:|||.|||||:|::|::.:|.|..|.|.:.:|||:||||:.:|
Zfish   502 ELASRMENERTKDMIIEQRFHRAIIGQKGEKIKEIRDKFPEVIINFPDPAQKSDIVQLRGPRTEV 566

  Fly   579 DKCHKDLLKLVKEIQESSHIIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIV 643
            :||.|.:.|:|.|:.|:|..:.|||||||||.:||||||||||||:||.||||||||...:|:||
Zfish   567 EKCSKFMQKMVAEMVENSFSVSVPIFKQFHKNIIGKGGANIKKIREETNTKIDLPAENSNSEMIV 631

  Fly   644 ITGKKENVLEAKERIQKIQNELSDIVTEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNS 708
            |||||.|...||.||..||.||::|...||.||.|.:||:||:.|:.:.|||||||||.|.||..
Zfish   632 ITGKKANCEAAKNRILAIQKELANITEVEVSIPSKLHNSLIGSKGRFVRSIMEECGGVHIHFPTE 696

  Fly   709 DSKSDKVTIRGPKDDVEKAKVQLLELANERQLASFTAEVRAKQQHHKFLIGKNGASIRKIRDATG 773
            .|..|.||||||.::|||||.|||.||.|:|..|.|.|:|||.::|||||||.|.:|||:||:||
Zfish   697 GSGIDAVTIRGPAEEVEKAKKQLLSLAEEKQTKSHTVELRAKPEYHKFLIGKGGGNIRKVRDSTG 761

  Fly   774 ARIIFPSNEDTDKEVITIIGKEESVKKAREQLEAIIKECDEVTEGEVSVDPKHHKHFVAKRGFIL 838
            ||||||:.||.|.|:||:||.||:|.:|:::|||:||..|.:.|..:.||||||:.|||:||.:|
Zfish   762 ARIIFPTAEDKDHELITVIGTEEAVAEAQKELEALIKSLDNIVEDFMIVDPKHHRFFVARRGQVL 826

  Fly   839 HRISEECGGVMISFPRVGINSDKVTIKGAKDCIEAARQRIEEIVADLEAQTTIEVVIPQRHHRTI 903
            ..|::|.|||::||||....|||||:||||||:|||::|:.|::.||:||.|:|.||||:.||:|
Zfish   827 RDIADEYGGVIVSFPRTAAQSDKVTLKGAKDCVEAAKKRMLEMIEDLDAQVTMECVIPQKFHRSI 891

  Fly   904 MGARGFKVQQVTFEFDVQIKFPDRDATEPVEGLTNGGSGENGGENEGQEGEQEVEKEAEQEPVRQ 968
            ||.:|.::||:|.:.:||||||||:..:..:....    |||      |...||::..:....::
Zfish   892 MGPKGSRIQQITKDHNVQIKFPDREEQQQADASVQ----ENG------EANGEVKEPVDPTAPKK 946

  Fly   969 CDVIRITGRIEKCEAAKQALLDLIPIEEELSVPFDLHRTIIGPRGANVRQFMSKHDVHVELPPSE 1033
            ||||.::||.|:||||.:||..|:|:...:.|||:|||.|||.:|:.:|:.|.:.:|::::|..|
Zfish   947 CDVIVLSGRKERCEAAVEALKALVPVTIAVEVPFELHRYIIGQKGSGIRKMMDEFEVNIQVPAHE 1011

  Fly  1034 LKSDVIKVCGTPARVAEAREALVKMIEDYEADRADRELRSFVLQVDVDTEFHSKLIGRHGAVINK 1098
            |:||:|.:.|..:.:..|:|.|::.:::.:|::.||.||||.|.:.|:.::|.|:|||.||:|:.
Zfish  1012 LQSDIISITGLASHLDRAKEGLLERVKELQAEQEDRALRSFKLTITVEPKYHPKIIGRKGAIISH 1076

  Fly  1099 LRADHDVIISLPKRDEPNDRIISITGYQANAEAARDAILEIVGDPETLHREVIEIDKRIHPHLIG 1163
            :|.||:|.|..|::::.|...|:||||:.||.||||||..||.:.|.:..|.|.:|.|:|..:||
Zfish  1077 IRHDHEVNIQFPEKNDENQDQITITGYEQNAIAARDAIQAIVDELEEMISEDITLDSRVHARIIG 1141

  Fly  1164 QRRRTIRKIIEDNKVNIKF----SADDDNPNSIFISGKIEDVENVKELLFGMAEDYERDYLDNVA 1224
            .|.:.||||:::.||:::|    :||   ||.:.::|:.|.|:...:.|..:.|:|..|.::|.|
Zfish  1142 ARGKGIRKIMDEFKVDVRFPQSGAAD---PNLVTVTGRPEHVDEAIDHLLNLEEEYMADVVENEA 1203

  Fly  1225 IAPPTIGAFLTGQGSGSDAAGASE-----NGFVIKDAPWEKQKQAKNLTAPNTQSQEDFPHFAAG 1284
            ..     |::  :.|||.|:...|     .|||:::|||    ...|..||:..|.|:||.|   
Zfish  1204 KM-----AYM--KPSGSSASSMEEPRGPSKGFVVREAPW----ATGNEKAPDMSSSEEFPSF--- 1254

  Fly  1285 GAPVASTPITSVWGPK 1300
            |||||:....|.||||
Zfish  1255 GAPVAAAARASPWGPK 1270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833 24/66 (36%)
KH-I_Vigilin_rpt2 165..239 CDD:411834 37/73 (51%)
KH-I_Vigilin_rpt3 243..>290 CDD:411835 25/46 (54%)
KH-I_Vigilin_rpt4 315..376 CDD:411836 38/60 (63%)
KH-I_Vigilin_rpt5 382..449 CDD:411837 19/68 (28%)
KH-I_Vigilin_rpt6 451..517 CDD:411804 28/66 (42%)
KH-I_Vigilin_rpt7 522..588 CDD:411838 33/65 (51%)
KH-I_Vigilin_rpt8 599..659 CDD:411839 43/59 (73%)
KH-I_Vigilin_rpt9 668..737 CDD:411840 41/68 (60%)
KH-I_Vigilin_rpt10 741..806 CDD:411841 39/64 (61%)
KH-I_Vigilin_rpt11 817..882 CDD:411842 38/64 (59%)
KH-I_Vigilin_rpt12 890..991 CDD:411843 42/100 (42%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 26/76 (34%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845 33/69 (48%)
KH-I_Vigilin_rpt15 1147..1214 CDD:411846 23/70 (33%)
hdlbpaNP_958882.2 None

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