DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp1 and hdlbpb

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:XP_021335983.2 Gene:hdlbpb / 555414 ZFINID:ZDB-GENE-030131-6822 Length:1259 Species:Danio rerio


Alignment Length:1254 Identity:565/1254 - (45%)
Similarity:848/1254 - (67%) Gaps:47/1254 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SYDDLFPALPANTSAQSQSG---ASGSTLARVTSSQKTHIVHVPCKERKSTESEKFGEGESKRIC 122
            :|.:.||.||...|...:||   .:.|.:..:.:|..|.:.|||.:||:..::.:|||||..::|
Zfish    37 TYLEAFPPLPEKGSPGEKSGEPAGAWSKIRPIKASVITQVFHVPLEERRYKDNSQFGEGEEAKVC 101

  Fly   123 QQITKETGAQIEIVSGKNQSLTFLIKGKQSELLDARRKILMGFSTQASRQVTVPREHFRVILGKG 187
            ..|.::|||.||:...|:|.|:.::.||...::.||::|:....||||..|.:|:||.|.::||.
Zfish   102 LDIMQKTGAHIELSLAKDQGLSIMVTGKLDSVMKARKEIVARLQTQASATVLIPKEHHRFVIGKN 166

  Fly   188 GQRLREIERVTATRINIPSQSDESEFITIAGTKEGIAQAEQEIRQLSAEQYKKSSDRITVPKVYH 252
            |::|:|:|..|||:|.||...|.:..|.|.||||||.:|..||:.:||||.|::.:|:...|.:|
Zfish   167 GEKLQELELKTATKIAIPRSDDPNANIRITGTKEGIEKARHEIQLISAEQDKRAVERLCFEKAFH 231

  Fly   253 PFIVGPYSENLNKLQEETGARINVPPQQVQKDEIVISGEKDAVAAAKAKVEAIYKDMEKKCSTVS 317
            |||.|.|:..:.:|.:||||||::||..:.||||||:|||:|||.|.|::.|.|::.::|.:|:|
Zfish   232 PFIAGAYNRLVQELSQETGARISIPPPSIPKDEIVITGEKEAVAMAIARIRATYEEKKRKTTTIS 296

  Fly   318 VEVAKPKHRYVIGPKGSTIAEILQLTGVSVEMPPNDSPSETITLRGPQVALGNALTVVYQKSNSV 382
            |||.|.:|:|::||||:|:.|||:.|||||||||.||.||||.|||....||.|||.||.|:.||
Zfish   297 VEVKKSQHKYIVGPKGNTLQEILENTGVSVEMPPLDSASETIILRGEPDKLGPALTQVYAKAKSV 361

  Fly   383 KSVEINAAHWIHKYVIGRKGANMKQLEEDCPNVNVNCL--EDKIKLEGDPENVDRAVAYLSEIIK 445
            ...|:.|..|:|:::||:||.|:.::.:..|.|::...  |::|.|||..|.|::|...:.||||
Zfish   362 IVAEVIAPAWLHRFIIGKKGQNISRITQQLPKVHIEFTDGEERICLEGPTEEVEQAQIQIQEIIK 426

  Fly   446 NYEENFTFEVMTVNPSYYKHIIGKAGANVNRLKDELKVNINI-EEREGQNNIRIEGPKEGVRQAQ 509
            :......:..:.::..:::|:|||.|||:||:|::.||::.| ::.|....:||||..:||:.|:
Zfish   427 DLMVRMDYTEINIDQRFHRHLIGKNGANINRIKEQYKVSVRIPQDSERCGLVRIEGDPQGVQLAR 491

  Fly   510 LELQEKIDKLENEKSKDVIIDRRLHRSIIGAKGEKIREVKDRYRQVTITIPTPQENTDIVKLRGP 574
            .||.:...::|||::||:||:::.||:|||.|||||:||:|::.:|.|..|..|:.:|||:||||
Zfish   492 KELMDMAQRMENERTKDLIIEQKFHRTIIGQKGEKIKEVRDKFPEVIIIFPDQQQKSDIVQLRGP 556

  Fly   575 KEDVDKCHKDLLKLVKEIQESSHIIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTN 639
            |.:|:||.|.|.||:.|:.|||..|.|||.|||||.:||||||||||||:||.||||||.|...:
Zfish   557 KNEVEKCAKFLQKLIAELVESSFSISVPIHKQFHKNIIGKGGANIKKIREETNTKIDLPTENSNS 621

  Fly   640 EVIVITGKKENVLEAKERIQKIQNELSDIVTEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIK 704
            |||||||||.|...|:|||..|:.||:.:...||.||.|.:||:||:.|.|:.||||:||||.|.
Zfish   622 EVIVITGKKSNCEAARERILAIEKELASMKEVEVSIPAKLHNSLIGSKGSLVRSIMEDCGGVHIH 686

  Fly   705 FPNSDSKSDKVTIRGPKDDVEKAKVQLLELANERQLASFTAEVRAKQQHHKFLIGKNGASIRKIR 769
            ||...|..|:||||||.::||:|:.|||:||.|:|:.:|:.|::||.::||:|||:.||:||::|
Zfish   687 FPAEGSGLDRVTIRGPAEEVERARKQLLQLAEEKQVNNFSVELQAKPEYHKYLIGRGGANIRRVR 751

  Fly   770 DATGARIIFPSNEDTDKEVITIIGKEESVKKAREQLEAIIKECDEVTEGEVSVDPKHHKHFVAKR 834
            |.|||||||||.:|.::|.|||:||||:|..|:.:||.:||..|:|.|..:.|:|:||:|||.:|
Zfish   752 DRTGARIIFPSADDQEQEHITIMGKEEAVILAQRELETLIKNLDDVIEDSMIVEPRHHRHFVCRR 816

  Fly   835 GFILHRISEECGGVMISFPRVGINSDKVTIKGAKDCIEAARQRIEEIVADLEAQTTIEVVIPQRH 899
            |.:|..::||.|||.:||||.|.:||.:|:||.::|::||::||:|||.|||:|.::||:||||:
Zfish   817 GQVLRELAEEYGGVAVSFPRTGTHSDSITLKGPRECVDAAKKRIQEIVCDLESQVSMEVLIPQRY 881

  Fly   900 HRTIMGARGFKVQQVTFEFDVQIKFPDRD---ATEPVEGLTNGGSGENGGENEGQEGEQEVEKEA 961
            ||.|||.:|.::||:|.|.:||||||||:   |.|||       |.|||              :.
Zfish   882 HRAIMGPKGCRIQQITREHEVQIKFPDREESAAQEPV-------SQENG--------------DT 925

  Fly   962 EQEPVRQCDVIRITGRIEKCEAAKQALLDLIPIEEELSVPFDLHRTIIGPRGANVRQFMSKHDVH 1026
            :..| |:||:|.:|||.||||.|:.|||.|:|:..::.|.:||||.|||.:|:.:|:.|..::|:
Zfish   926 DLTP-RKCDIITVTGRAEKCELARAALLALVPVTIDVEVSYDLHRYIIGQKGSGIRKMMEDYEVN 989

  Fly  1027 VELPPSELKSDVIKVCGTPARVAEAREALVKMIEDYEADRADRELRSFVLQVDVDTEFHSKLIGR 1091
            :.:|..|.:||:||:.|..|.|..|:..|:..:::.:|::.||.|||:.:.:.||.::|.|:|||
Zfish   990 IWVPQPEQQSDIIKITGQVASVERAKHGLLDRVKELQAEQEDRALRSYKVTLSVDPKYHPKIIGR 1054

  Fly  1092 HGAVINKLRADHDVIISLPKRDEPNDRIISITGYQANAEAARDAILEIVGDPETLHREVIEIDKR 1156
            .||||:::|.::||.:..|.:.:....:|.|:||:.||..|:.||.::|...:.:..|.:.:|:|
Zfish  1055 KGAVISQIRKEYDVNVQFPDKGDEQQDVIVISGYERNANDAKSAIEQLVAALQEMVSEDVRLDRR 1119

  Fly  1157 IHPHLIGQRRRTIRKIIEDNKVNIKF-SADDDNPNSIFISGKIEDVENVKELLFGMAEDYERDYL 1220
            :|..:||.|.:.||||:|:.||:|:| ....::||.:.::|..|:|:|..:.|..:.|:|.....
Zfish  1120 VHARIIGARGKAIRKIMEEFKVDIRFPQPGSEDPNKVTVTGLPENVDNTIDHLLNLEEEYMLSVT 1184

  Fly  1221 DNVAIA----PPTIGAFLTGQGSGSDAAGASENGFVIKDAPWEKQKQAKNLTAPNTQSQEDFPHF 1281
            :...:|    ||   :...|.|...:...|...|||::||||    .|:...||:..|.|:||.|
Zfish  1185 ETETMAAYMKPP---SKTMGTGGNDEDNRALAKGFVVRDAPW----NAQGNKAPDVSSAEEFPTF 1242

  Fly  1282 AAGGAPVASTPITSVWGPK 1300
            .:|..|..    ||.||||
Zfish  1243 GSGITPKQ----TSAWGPK 1257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833 25/66 (38%)
KH-I_Vigilin_rpt2 165..239 CDD:411834 37/73 (51%)
KH-I_Vigilin_rpt3 243..>290 CDD:411835 23/46 (50%)
KH-I_Vigilin_rpt4 315..376 CDD:411836 39/60 (65%)
KH-I_Vigilin_rpt5 382..449 CDD:411837 24/68 (35%)
KH-I_Vigilin_rpt6 451..517 CDD:411804 23/66 (35%)
KH-I_Vigilin_rpt7 522..588 CDD:411838 35/65 (54%)
KH-I_Vigilin_rpt8 599..659 CDD:411839 43/59 (73%)
KH-I_Vigilin_rpt9 668..737 CDD:411840 38/68 (56%)
KH-I_Vigilin_rpt10 741..806 CDD:411841 35/64 (55%)
KH-I_Vigilin_rpt11 817..882 CDD:411842 32/64 (50%)
KH-I_Vigilin_rpt12 890..991 CDD:411843 48/103 (47%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 26/76 (34%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845 25/69 (36%)
KH-I_Vigilin_rpt15 1147..1214 CDD:411846 23/67 (34%)
hdlbpbXP_021335983.2 None

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