DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp1 and bicc2

DIOPT Version :9

Sequence 1:NP_001286573.1 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_981965.1 Gene:bicc2 / 402785 ZFINID:ZDB-GENE-110110-3 Length:846 Species:Danio rerio


Alignment Length:619 Identity:142/619 - (22%)
Similarity:243/619 - (39%) Gaps:125/619 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 KDELKVNINIEER----EGQNNIRIEGPKEGVRQAQLELQEKIDKLENEKSKDVIIDRRLHRSII 538
            :.||....::|||    ..:..|.:..|.|.   :.|..:|..:|:..|.:..|....:|.   |
Zfish    42 QQELSDPDSVEERFRIDRKKLEIMLYAPTEA---SGLSGEEFFEKVMRETNTQVKWPSKLK---I 100

  Fly   539 GAKGEKIREVKDRYRQVTITIPTPQENTDIVKLRGPKEDVDKCHKDLLKLVKEIQESSHIIEVPI 603
            |||.:|                .|.     ||:.|.:.:|.:..:.:|:|: |.:.:...:::.:
Zfish   101 GAKSKK----------------DPH-----VKVEGKRANVLEAKRKILELL-ETKVNKVTLKMDV 143

  Fly   604 FKQFHKFVIGKGGANIKKIRDETQTKIDLP------AEGDTNEVIVITGKKENVLEAKERIQKIQ 662
            ....|..||||||.||||:.:||...|..|      :.|:.:..:.|.|..|.|..|:::|:.:|
Zfish   144 THTEHSHVIGKGGGNIKKVMEETSCHIHFPDSNRSNSSGEKSNQVSIAGPVEGVESARKQIRDLQ 208

  Fly   663 NELSDIVTEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDS-KSDKVTIRGPKDD--- 723
            .     :.....:|......::......:...:.:..||::.|..... .....::||...:   
Zfish   209 P-----LVLSFDLPVTLVGGVVADTSSPVIQHVAQAFGVTVSFRTQPKLYCSTCSVRGVTANTAA 268

  Fly   724 VEKAKVQLLELANERQLAS------FTAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFP--- 779
            ::||...|:||.    |.|      .:.::....|.|.||:|:|||:...:...|..:||.|   
Zfish   269 LKKAICVLMELL----LGSGVNGVMVSTQLDVTSQQHLFLLGQNGANFLTVMHQTHTQIILPDLS 329

  Fly   780 SNEDTDKEVITIIGKEESVKKAREQLEAIIKEC---DEVTEGEVSVDPKHHKHFVAKRGFILHRI 841
            |.:.|..  :.|.|..:.|..||:||...:..|   |...|||  .||:.....:...       
Zfish   330 SPQHTPS--LLIQGTADGVCLARQQLMDCLPVCLMFDLKDEGE--SDPRRFTQMMQNL------- 383

  Fly   842 SEECGGVMISF-PRVGINSDKVTIKGAK----DCIEAAR--QRIEEIVADLEAQTTIEVVIPQRH 899
                 ||.||. |:|...:..|.:||.:    :..||.|  ..::.....:..::..||.:..:|
Zfish   384 -----GVFISVKPKVKQTAKSVVVKGLERNIVNVYEARRLLLGLDSTEVSVSTKSVCEVSVMSKH 443

  Fly   900 HRTIM----GARGF----KVQQVTFEFDVQIKFPD----------RDATEPVEGLT----NGGSG 942
            ....:    |..|:    .:||:.......:..||          |....|..||.    :|..|
Zfish   444 SVDPLLANNGITGYWLNVLMQQLRLTDTGSVSIPDAVIGSLSGKPRPTPPPPPGLAVSSEDGRIG 508

  Fly   943 ENGG--------ENEGQEGEQEVE----KEAEQEPVRQCDVIRITGRIEKCEAAKQALLDLIPIE 995
            ..|.        |||.|:.:.|.|    ..:|...||:......:.|..:.|::::...   ||.
Zfish   509 LKGVESKLEKILENEDQQTQAESETCSMSHSEVTDVREVKPTPSSRRGSQSESSREFNQ---PIT 570

  Fly   996 EELSVPFDLHRTIIG-PRGANVRQFMSKHDVHVE 1028
            .|.||..|:....:. .|..::|.|.|. |::.|
Zfish   571 SERSVRADVESVYLNRDRRCSLRIFPSM-DINNE 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_001286573.1 vigilin_like_KH 170..231 CDD:239087
vigilin_like_KH 242..>290 CDD:239087
vigilin_like_KH 315..373 CDD:239087
vigilin_like_KH 384..440 CDD:239087
vigilin_like_KH 454..513 CDD:239087 9/38 (24%)
vigilin_like_KH 524..586 CDD:239087 12/61 (20%)
vigilin_like_KH 598..659 CDD:239087 21/66 (32%)
vigilin_like_KH 670..732 CDD:239087 8/65 (12%)
vigilin_like_KH 744..806 CDD:239087 20/64 (31%)
vigilin_like_KH 817..879 CDD:239087 17/68 (25%)
vigilin_like_KH 890..989 CDD:239087 27/132 (20%)
vigilin_like_KH 995..1055 CDD:239087 10/35 (29%)
vigilin_like_KH 1075..1137 CDD:239087
vigilin_like_KH 1149..1208 CDD:239087
bicc2NP_981965.1 vigilin_like_KH 138..205 CDD:239087 21/66 (32%)
vigilin_like_KH 291..354 CDD:239087 20/64 (31%)
SAM 743..806 CDD:197735
SAM_BICC1 745..809 CDD:188919
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589331
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.