DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp1 and BicC

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_476865.1 Gene:BicC / 34946 FlyBaseID:FBgn0000182 Length:905 Species:Drosophila melanogaster


Alignment Length:505 Identity:104/505 - (20%)
Similarity:195/505 - (38%) Gaps:116/505 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   612 IGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGK--KENVLEA-KERIQKIQNELSDIVTEEV 673
            :|.|..:      |||::|. ..:.|.:::..|..|  .:|..:. .||.:..:.:|..::..|.
  Fly    48 VGSGAPS------ETQSEIS-SVDSDWSDIRAIAMKLGVQNPDDLHTERFKVDRQKLEQLIKAES 105

  Fly   674 QI-----PPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDSKSDKVTIRGPKDDVEKAKVQLLE 733
            .|     ...:::.|:.|....:|   ..|   .:|......|...|.|.|..|.|::||.::|.
  Fly   106 SIEGMNGAEYFFHDIMNTTDTYVS---WPC---RLKIGAKSKKDPHVRIVGKVDQVQRAKERILS 164

  Fly   734 LANERQL-------ASFTAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFP----SNEDTDKE 787
            ..:.|..       .|:|        .|.::||:.|.:|::|.|.|...|.||    ||......
  Fly   165 SLDSRGTRVIMKMDVSYT--------DHSYIIGRGGNNIKRIMDDTHTHIHFPDSNRSNPTEKSN 221

  Fly   788 VITIIGKEESVKKAREQLE---AIIKECDEVTEGEVSVDPKHHKHFVAKRGFILHRISEECGGVM 849
            .:::.|..|.|::||..:.   .::...:....|.....|.|...::        ::.|....|.
  Fly   222 QVSLCGSLEGVERARALVRLSTPLLISFEMPVMGPNKPQPDHETPYI--------KMIETKFNVQ 278

  Fly   850 ISF-PRVGINSDKVTIKGAKDCIEAARQR----------IEEIVADLEAQTTIEVVIPQRHHRTI 903
            :.| .|..:::..|.:||::.  |:|:.|          .|.|.:.:.....:| :.|| ||..:
  Fly   279 VIFSTRPKLHTSLVLVKGSEK--ESAQVRDATQLLINFACESIASQILVNVQME-ISPQ-HHEIV 339

  Fly   904 MGARGFKVQQVTFEFDVQIKFPDRDATEPVEGLTNGGSGENGGENEGQEGEQEVEKEAEQEPVRQ 968
            .|.....:..:......:|.|||.                               .:...:|:::
  Fly   340 KGKNNVNLLSIMERTQTKIIFPDL-------------------------------SDMNVKPLKK 373

  Fly   969 CDVIRITGRIEKCEAAKQALLDLIPIEEELSVPFDLHRTIIGPRGANVRQFMSKHDVHVELPPSE 1033
            ..| .|:|||:....|:|.||..:|:......| |.|..     .:.:....:|:.|::.|...:
  Fly   374 SQV-TISGRIDDVYLARQQLLGNLPVALIFDFP-DNHND-----ASEIMSLNTKYGVYITLRQKQ 431

  Fly  1034 LKSDV-IKVCGTPA---RVAEAREALVKM--------IEDYEADRADREL 1071
            .:|.: |.|.|...   ::.|||:.::::        |.||.....|::|
  Fly   432 RQSTLAIVVKGVEKFIDKIYEARQEILRLATPFVKPEIPDYYFMPKDKDL 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833
KH-I_Vigilin_rpt2 165..239 CDD:411834
KH-I_Vigilin_rpt3 243..>290 CDD:411835
KH-I_Vigilin_rpt4 315..376 CDD:411836
KH-I_Vigilin_rpt5 382..449 CDD:411837
KH-I_Vigilin_rpt6 451..517 CDD:411804
KH-I_Vigilin_rpt7 522..588 CDD:411838
KH-I_Vigilin_rpt8 599..659 CDD:411839 12/49 (24%)
KH-I_Vigilin_rpt9 668..737 CDD:411840 16/73 (22%)
KH-I_Vigilin_rpt10 741..806 CDD:411841 20/68 (29%)
KH-I_Vigilin_rpt11 817..882 CDD:411842 14/75 (19%)
KH-I_Vigilin_rpt12 890..991 CDD:411843 20/100 (20%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 18/88 (20%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845
KH-I_Vigilin_rpt15 1147..1214 CDD:411846
BicCNP_476865.1 KH-I_BICC1_rpt1 85..166 CDD:411848 19/86 (22%)
KH-I_BICC1_rpt2 171..240 CDD:411849 20/76 (26%)
KH-I_BICC1_rpt3 325..393 CDD:411850 18/101 (18%)
SAM_BICC1 805..868 CDD:188919
Blue background indicates that the domain is not in the aligned region.

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