DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp1 and Hdlbpl2

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_001406472.1 Gene:Hdlbpl2 / 302773 RGDID:1563104 Length:1250 Species:Rattus norvegicus


Alignment Length:1212 Identity:374/1212 - (30%)
Similarity:640/1212 - (52%) Gaps:68/1212 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 SQKTHIVHVPC-KERKSTESEKFGEGESKRICQQITKETGAQIEIVSGKNQSLTFLIKGKQSELL 155
            |..|.:.||.. ||...|:   ||||...:....|.:.||..:|....|:|.|...:.|....:.
  Rat    68 STLTQVFHVLLEKENYLTQ---FGEGTLAKFYAHIMENTGVNLESSFIKDQGLYVTVFGNSEAVT 129

  Fly   156 DARRKILMGFSTQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDESEFITIAGTK 220
            :|..:||.....:......:.::.....|.:.|.:.::.|:.......|.|..:.|.:|....| 
  Rat   130 NAENEILKWCQEKYLPLTLISKQEHCFFLDQTGDKSQDTEQEAEINAQIISPHNHSHYINTVDT- 193

  Fly   221 EGIAQAEQEIRQLSAEQYKKSSD--RITVPKVYHPFIVGPYSENLNKLQEETGARINVPPQQVQK 283
             .:.:.:.....||.......||  .:.:.|.::|.|..||.:..:..||   ...:||.|....
  Rat   194 -NLTKMKSSDGSLSTSDRNSKSDIQILEMEKAFNPRIGKPYLQASDIFQE---TEEHVPFQLSSA 254

  Fly   284 DEIVISGEKDAVAAAKAKVEAIYKDMEKKCSTVSV-EVAKPKHRYVIGPKGSTIAEILQLTGVSV 347
            :|..:...:..:...:.:...  .||.:|.||::. .:.|.:..|....|.:.:.|||:.:..|.
  Rat   255 NETDVDINERQLNVDQTRCHK--NDMTEKSSTITEGMMMKFQGNYTRSLKRNFLEEILETSEDST 317

  Fly   348 EMPPNDSPSETITLRGPQVALGNALTVVYQKSNSVKSVEINAAHWIHKYVIGRKGANMKQLEEDC 412
            ...|::|.|:::|......:.|.....|:...:......|.|..|:|:::||:||..:.::.|..
  Rat   318 GQSPSESISDSMTQHSEPDSSGEIFNEVHGNDDDYIVSSIFAPSWLHRFIIGKKGEKIAEISECV 382

  Fly   413 PNVNVN-CLEDKIKLEGDPENVDRAVAYLSEIIKNYEENFTFEVMTVNPSYYKHIIGKAGANVNR 476
            |.|.:: ..:|||.|:|..::|:.|......|:|:......:..:..:..::|::.|..||.:|:
  Rat   383 PKVQIHFTAKDKITLKGPIDDVNYAQEKFDIIVKDLISRMEYTEINGDSKFHKYLTGNNGAILNK 447

  Fly   477 LKDELKVNIN-IEEREGQNNIRIEGPKEGVRQAQLELQEKIDKLENEKSKDVIIDRRLHRSIIGA 540
            :.:..:|:|. :.|.|..:.|||||...||:||:.||.:..:.||.|.|:|:||..:.|..:||.
  Rat   448 IAERNQVSITMVPENELNHTIRIEGESLGVQQAKKELLDLANNLEEEYSQDIIIKHQFHHILIGQ 512

  Fly   541 KGEKIREVKDRYRQVTITIPTPQENTDIVKLRGPKEDVDKCHKDLLKLVKEIQESSHIIEVPIFK 605
            |||::||:..::..|.:..|.|.|.:|||:|.||:.:.:||.:.|..::.:|:|:::.|.:.|.|
  Rat   513 KGERVREICKKFPDVILNFPHPAEKSDIVQLIGPRYESEKCAQYLENMLTDIKENNYSISISIIK 577

  Fly   606 QFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEAKERIQKIQNELSDIVT 670
            :.||.:||||.:|||||.:.|.|||..|.|...:|..:|||..||...|:..|..||.|::|...
  Rat   578 KLHKRLIGKGASNIKKISETTNTKISFPPENCNSEEFIITGYPENCEIARNWILSIQQEIADTAE 642

  Fly   671 EEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDSKSDKVTIRGPKDDVEKAKVQLLELA 735
            ||:.||...|..:......|::||:||||.:.:.||.:.|..:||.|.|..:.|||||.:||:||
  Rat   643 EEITIPTNLYKYLNNPKECLLNSIIEECGKIHLHFPKNKSSLNKVIIMGSVESVEKAKAKLLKLA 707

  Fly   736 NERQLASFTAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDTDKEVITIIGKEESVKK 800
            .|.|..:::.::|.|.|:|:||:.|||.:|.:|.|.||..::||::.:.|:|.:||.|.|||||:
  Rat   708 EEEQAKNYSEKIRVKSQYHQFLVNKNGGNISQICDETGTCVLFPNHTNKDQESLTITGSEESVKE 772

  Fly   801 AREQLEAIIKECDEVTEGEVSVDPKHHKHFVAKRGFILHRISEECGGVMISFPRVGINSDKVTIK 865
            .:::||.::|:.:...:..:.::.:.|.:||.:||.:|..::||.|||:|:|...|..:.|||||
  Rat   773 VQKRLEDLVKDFENEVDDSILINRRFHHYFVMRRGQLLKEMTEEYGGVVITFSYAGRQNTKVTIK 837

  Fly   866 GAKDCIEAARQRIEEIVADLEAQTTIEVVIPQRHHRTIMGARGFKVQQVTFEFDVQIKFPDRDAT 930
            |||.|:|||::.|:.|...|.:|.|...||||.....|||....::||:..::.|:|||||.:  
  Rat   838 GAKPCVEAAKKHIKAIFEPLGSQVTTRYVIPQNFQPFIMGPITSRIQQIARDYKVEIKFPDIE-- 900

  Fly   931 EPVEGLTNGGSGENGGENEGQEGEQEVEKEAEQEPVRQCDVIRITGRIEKCEAAKQALLDLIPIE 995
            :|...:      :...:.:|:|..::..|:......|:.|.|.|:|::|.|:||.:||..:||:.
  Rat   901 KPAINM------DLATQEKGKEKWKKPAKDLAPNSPRKSDTIFISGQVENCKAATEALASIIPVT 959

  Fly   996 EELSVPFDLHRTIIGPRGANVRQFMSKHDVHVELPPSELKSDVIKVCGTPARVAEAREALVKMIE 1060
            .|:.||..||..|||.:|:.:|:.:.:.:||::.|.....||:|.:.|..|.|.:|:..|.|.::
  Rat   960 AEVHVPLHLHPYIIGHKGSGLRKLVKEFEVHMQPPQPGKNSDIISIMGLAANVEQAKMKLQKRVK 1024

  Fly  1061 DYEADRADRELRSFVLQVDVDTEFHSKLIGRHGAVINKLRADHDVIISLPKR--DEPNDRIISIT 1123
            ..:.:..||.||:|.|..::|:::.:|:.|..|.:|.::..:|||.:..||:  .|..|: |:||
  Rat  1025 ALQMEIEDRTLRNFKLMFNLDSKYRAKITGHKGLLITQICTEHDVTVRFPKKGSHEVQDQ-ITIT 1088

  Fly  1124 GYQANAEAARDAILEIVGDPETLHREVIEIDKRIHPHLIGQRRRTIRKIIEDNKVNIKFSADDD- 1187
            ||:.|..||||||:.::...|....:.|.:::::..::.|.|.:||.||::..:|:|:...... 
  Rat  1089 GYKENTLAARDAIMRVLHKIEKTISKEITLNQQVRSNVFGFRGKTINKIMDQYQVDIRSPPKGSY 1153

  Fly  1188 NPNSIFISG-------KIEDVENVKELLFGMAEDYERDY-------LDNVAIAPPTIGAFLTGQG 1238
            ||| |.::|       .||.:.|:::.....|.::|...       |.|:|:.|           
  Rat  1154 NPN-ITVTGLPDNVEKAIEHILNLEKYYLSAAANHESQQEEAKSMSLCNIAMTP----------- 1206

  Fly  1239 SGSDAAGASENGFVIKDAPWEKQKQAKNLT-APNTQSQEDFP 1279
                     ...||.|..|.    .||..| .|:..:.|.||
  Rat  1207 ---------SKSFVRKYVPC----YAKTTTKLPDVDNCEHFP 1235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833 19/67 (28%)
KH-I_Vigilin_rpt2 165..239 CDD:411834 10/73 (14%)
KH-I_Vigilin_rpt3 243..>290 CDD:411835 12/48 (25%)
KH-I_Vigilin_rpt4 315..376 CDD:411836 13/61 (21%)
KH-I_Vigilin_rpt5 382..449 CDD:411837 20/67 (30%)
KH-I_Vigilin_rpt6 451..517 CDD:411804 20/66 (30%)
KH-I_Vigilin_rpt7 522..588 CDD:411838 26/65 (40%)
KH-I_Vigilin_rpt8 599..659 CDD:411839 27/59 (46%)
KH-I_Vigilin_rpt9 668..737 CDD:411840 28/68 (41%)
KH-I_Vigilin_rpt10 741..806 CDD:411841 26/64 (41%)
KH-I_Vigilin_rpt11 817..882 CDD:411842 27/64 (42%)
KH-I_Vigilin_rpt12 890..991 CDD:411843 31/100 (31%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 24/76 (32%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845 26/71 (37%)
KH-I_Vigilin_rpt15 1147..1214 CDD:411846 18/74 (24%)
Hdlbpl2NP_001406472.1 KH-I 71..136 CDD:469614 19/67 (28%)
KH-I_Vigilin_rpt5 352..420 CDD:411837 20/67 (30%)
KH-I_Vigilin_rpt6 422..489 CDD:411804 20/66 (30%)
KH-I 494..560 CDD:469614 26/65 (40%)
KH-I_Vigilin_rpt8 570..631 CDD:411839 27/60 (45%)
KH-I 641..696 CDD:469614 19/54 (35%)
KH-I 713..778 CDD:469614 26/64 (41%)
KH-I 789..853 CDD:469614 27/63 (43%)
KH-I 866..952 CDD:469614 28/93 (30%)
KH-I 957..1033 CDD:469614 23/75 (31%)
KH-I 1038..1110 CDD:469614 26/72 (36%)
KH-I 1112..1177 CDD:469614 17/65 (26%)

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