DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp1 and Hdlbpl1

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_001100436.1 Gene:Hdlbpl1 / 302772 RGDID:1562485 Length:677 Species:Rattus norvegicus


Alignment Length:698 Identity:222/698 - (31%)
Similarity:365/698 - (52%) Gaps:56/698 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 KEIQESSHIIEVPIFKQFHKFVIGKGGANIKKIRDETQTKIDLPAEGDTNEVIVITGKKENVLEA 654
            :.:|..||:..:                        ...|::.|:....:|..:...|.||....
  Rat    13 RSLQRESHVTNL------------------------NSRKVNFPSSSCNSENNISIRKPENREIC 53

  Fly   655 KERIQKIQNELSDIVTEEVQIPPKYYNSIIGTGGKLISSIMEECGGVSIKFPNSDSKSDKVTIRG 719
            ...|..|....:.....|:.|||..:.|:..:...||.||:||||.|.|.||:::....||.|.|
  Rat    54 HNWILSIPKNAAKDSEVEIPIPPSLHRSLTDSKKSLIGSIIEECGKVQIHFPSNNQGPQKVIISG 118

  Fly   720 PKDDVEKAKVQLLELANERQLASFTAEVRAKQQHHKFLIGKNGASIRKIRDATGARIIFPSNEDT 784
            ..|.|||||.:||:||.|.|..|::..:..|.::|:||:.|||.:::.|.:.||.|||||:.::.
  Rat   119 TTDIVEKAKKRLLQLAEEEQAKSYSVAIPVKSKYHQFLMSKNGGNLQSICEKTGVRIIFPTFKNK 183

  Fly   785 DKEVITIIGKEESVKKAREQLEAIIKECDEVTEGEVSVDPKHHKHFVAKRGFILHRISEECGGVM 849
            |:|.|||||.||:||..::.:|.::|:.::|.|..:.:.||.|.:||.:||.:|..|.:|.|||.
  Rat   184 DQESITIIGTEEAVKNVKKVVEVLLKDLEDVVEDNILISPKFHNYFVMQRGQLLREIIKEYGGVF 248

  Fly   850 ISFPRVGINSDKVTIKGAKDCIEAARQRIEEIVADLEAQTTIEVVIPQRHHRTIMGARGFKVQQV 914
            ::|...|..|.||||||||.|:|||::.|:.|...|.:|.|.:.|:|.:.|..|||....::||.
  Rat   249 VTFSYAGKQSTKVTIKGAKACVEAAKKHIQGIFDPLGSQVTAQCVVPPKFHPFIMGPICSRIQQT 313

  Fly   915 TFEFDVQIKFPDRDATEPVEGLTNGGSGENGGENEGQEGEQEVEKEAEQEPVRQCDVIRITGRIE 979
            ..|..|||||||   ||.....|:    ....|.|..:|.:.|.|.|...| ::.|....:|:.|
  Rat   314 ARECKVQIKFPD---TEKTTKKTH----PEVQEMEKDKGGKNVRKPASTSP-KKSDTTSTSGKTE 370

  Fly   980 KCEAAKQALLDLIPIEEELSVPFDLHRTIIGPRGANVRQFMSKHDVHVELPPSELKSDVIKVCGT 1044
            .|:.|.|||..|:|:..|:.|||.||..|||.||:.:|:.:...:||:::........:|.:.|.
  Rat   371 NCKEAAQALETLVPVTAEVQVPFHLHPYIIGHRGSGLRKLIKDFEVHIQVSQPGGNFHIISIMGL 435

  Fly  1045 PARVAEAREALVKMIEDYEADRADRELRSFVLQVDVDTEFHSKLIGRHGAVINKLRADHDVIISL 1109
            .|.|.:|:..|...::..:.:..|:.||||.....:|:::|||:.|..|.:|:::..::||.:..
  Rat   436 EANVEQAKTKLQNQVKALQMELDDQTLRSFRQTFRLDSKYHSKIFGNKGILISQICTEYDVTVHF 500

  Fly  1110 PKR--DEPNDRIISITGYQANAEAARDAILEIVGDPE-TLHREVIEIDKRIHPHLIGQRRRTIRK 1171
            .|:  :...|: |:|:|.::|...|||||:.::...| |:.|| |.::..:..::||...::|:|
  Rat   501 SKKGSNSTQDQ-ITISGSKSNILGARDAIMNMLRKIEKTVSRE-IPLNHHVCANIIGFGGKSIQK 563

  Fly  1172 IIEDNKVNIKFSADDDNPNS-IFISGKIEDVENVKELLFGMAEDYERDYLDNVAIAPPTIGAFLT 1235
            |:|...|:|:......:.|| |.:||...:|:...:.:..:    |:.:|......||:..   .
  Rat   564 IMEQYHVDIRVPPKGSHTNSTIIVSGSSANVQEAIDYILSL----EKHFLSVGKSDPPSDH---H 621

  Fly  1236 GQGSGSDAAGASENGFVIKDAPWEKQKQAKNLTA----PNTQSQEDFP 1279
            .:|...:.|..:...|       .|:...:|:.:    |:..:.||||
  Rat   622 KRGGVCNTAARTYKSF-------GKRNTLRNVKSTTHPPHLDNAEDFP 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833
KH-I_Vigilin_rpt2 165..239 CDD:411834
KH-I_Vigilin_rpt3 243..>290 CDD:411835
KH-I_Vigilin_rpt4 315..376 CDD:411836
KH-I_Vigilin_rpt5 382..449 CDD:411837
KH-I_Vigilin_rpt6 451..517 CDD:411804
KH-I_Vigilin_rpt7 522..588 CDD:411838
KH-I_Vigilin_rpt8 599..659 CDD:411839 6/59 (10%)
KH-I_Vigilin_rpt9 668..737 CDD:411840 31/68 (46%)
KH-I_Vigilin_rpt10 741..806 CDD:411841 27/64 (42%)
KH-I_Vigilin_rpt11 817..882 CDD:411842 30/64 (47%)
KH-I_Vigilin_rpt12 890..991 CDD:411843 35/100 (35%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 22/76 (29%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845 21/71 (30%)
KH-I_Vigilin_rpt15 1147..1214 CDD:411846 17/67 (25%)
Hdlbpl1NP_001100436.1 KH-I 69..136 CDD:469614 31/66 (47%)
KH-I 140..196 CDD:469614 24/55 (44%)
KH-I 216..280 CDD:469614 30/63 (48%)
KH-I 289..382 CDD:469614 35/100 (35%)
KH-I 384..459 CDD:469614 21/74 (28%)
KH-I 465..537 CDD:469614 21/72 (29%)
KH-I 539..605 CDD:469614 17/70 (24%)
Blue background indicates that the domain is not in the aligned region.

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