DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dp1 and fubl-4

DIOPT Version :9

Sequence 1:NP_001286573.1 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_491627.2 Gene:fubl-4 / 187350 WormBaseID:WBGene00019692 Length:586 Species:Caenorhabditis elegans


Alignment Length:318 Identity:82/318 - (25%)
Similarity:130/318 - (40%) Gaps:60/318 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   466 IIGKAGANVNRL--KDELKVNINIE-EREGQNNIRIEGPKEGVRQAQLELQE------------- 514
            :||:.|..:..:  |...:|.|..| ...|..::.|.|..|.:..|:..:.|             
 Worm    66 VIGRNGVEIQAISQKSGCRVQIVAEPSTTGYRSVDIYGISENIEVAKKLINEVVARGRKLSQEPL 130

  Fly   515 --------KIDKLENEKSKDVIIDRRLHR--SIIGAKGEKIREVKDRYRQVTITIPTPQEN--TD 567
                    .|..:.|.....:||....::  :|||.|||::|:::.......|.|   |||  .|
 Worm   131 PCSVPQFQPIPAVSNSSKVTIIIPIPANKCGAIIGKKGEQMRKLRSWTNCDFILI---QENNIAD 192

  Fly   568 IVK---LRG-PKE---------DV----DKCHKDLLKLVKEIQESSHIIEVPIFKQFHKFVIGKG 615
            .||   :.| |||         |:    |:|....:.....:...|..::||  :.....::|..
 Worm   193 SVKPLQITGQPKEVEHAKALVADILDGFDECPPAGMAGNSPVAAMSLQVKVP--RSTVGAIMGLQ 255

  Fly   616 GANIKKIRDETQTKIDLPAEGD---TNEVIVITGKKENVLEAKERIQKI-----QNELSDIVTEE 672
            |:|||||.:||:|||....:.|   ....:|:.|.|..|......:|||     :|..:.|....
 Worm   256 GSNIKKISNETETKIQFMPDDDPKLMERTLVVIGNKNKVYVCARLLQKIVEANSENANTPISLFY 320

  Fly   673 VQIPPKYYNSIIGTGGKLISSIMEECGGV--SIKFPNSDSKSDKVTIRGPKDDVEKAK 728
            :.||......:||.||:.|..|.:|.|..  ..:.|:..:...:..|||.:..||.||
 Worm   321 MLIPASKCGLVIGRGGETIRQINKESGAYCEMSRDPSISAIEKQFVIRGSETQVEHAK 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_001286573.1 vigilin_like_KH 170..231 CDD:239087
vigilin_like_KH 242..>290 CDD:239087
vigilin_like_KH 315..373 CDD:239087
vigilin_like_KH 384..440 CDD:239087
vigilin_like_KH 454..513 CDD:239087 12/49 (24%)
vigilin_like_KH 524..586 CDD:239087 24/82 (29%)
vigilin_like_KH 598..659 CDD:239087 19/63 (30%)
vigilin_like_KH 670..732 CDD:239087 18/61 (30%)
vigilin_like_KH 744..806 CDD:239087
vigilin_like_KH 817..879 CDD:239087
vigilin_like_KH 890..989 CDD:239087
vigilin_like_KH 995..1055 CDD:239087
vigilin_like_KH 1075..1137 CDD:239087
vigilin_like_KH 1149..1208 CDD:239087
fubl-4NP_491627.2 KH 50..119 CDD:197652 13/52 (25%)
KH 147..217 CDD:197652 22/72 (31%)
KH-I 238..302 CDD:238053 20/65 (31%)
KH_1 321..381 CDD:278442 18/58 (31%)
DUF1897 537..572 CDD:286140
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2506
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.860

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