DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dp1 and bcc-1

DIOPT Version :10

Sequence 1:NP_523781.2 Gene:Dp1 / 37116 FlyBaseID:FBgn0027835 Length:1301 Species:Drosophila melanogaster
Sequence 2:NP_502067.2 Gene:bcc-1 / 178008 WormBaseID:WBGene00000246 Length:644 Species:Caenorhabditis elegans


Alignment Length:267 Identity:64/267 - (23%)
Similarity:110/267 - (41%) Gaps:61/267 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   972 IRITGRIEKCEAAKQALLDLIPIEEE-LSVPFDLHRT----IIGPRGANVRQFMSKHDVHVELPP 1031
            :::.|.||:.|:|:..:|:.:.|::| :|:..:||.:    |||..|..:::.|.....|:..|.
 Worm    77 VKVIGSIEQIESARTLVLNSL
QIKKERVSLKMELHHSLHSHIIGKGGRGIQKVMKMTSCHIHFPD 141

  Fly  1032 SEL-----KSDVIKVCGTPARVAEAREALVKM--------IEDYEADRADRELRSFVLQVDVDTE 1083
            |..     |||.:.:.|||..|.||.:.|..|        :..|...:.|  ||..:.|:|:|..
 Worm   142 SNKYSDSNKSDQVSISGTPVNVFEALKHLR
SMCPLTVYMKLPWYNPGQPD--LRPLMSQMDLDVS 204

  Fly  1084 FHSKLIGRHGAVINKLRADHDVIISLPKRDEPNDRIISITGYQANAEAARDAILEIVGDPETLHR 1148
            ....                  |.||         .|.:||.|   :|:....:.:|.....|..
 Worm   205 VEQN------------------IYSL---------AIKMTGSQ---DASVLFAIRLVLHHFLLTE 239

  Fly  1149 EVIEIDKRI--------HPHLIGQRRRTIRKIIEDNKVNIKFSADDDNPNSIFISGKIEDVENVK 1205
            |.:.|..::        ....:.:.|..:|::...|.|.|:...:   ..||.|.|....|.||:
 Worm   240 EYLNISTQVLAREELNYQLENVEEHRERLREVCNKNNVTIQTFPE---TQSISIVGPPSGVLNVR 301

  Fly  1206 ELLFGMA 1212
            :||.|::
 Worm   302 KLLIGLS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dp1NP_523781.2 KH-I_Vigilin_rpt1 95..162 CDD:411833
KH-I_Vigilin_rpt2 165..239 CDD:411834
KH-I_Vigilin_rpt3 243..>290 CDD:411835
KH-I_Vigilin_rpt4 315..376 CDD:411836
KH-I_Vigilin_rpt5 382..449 CDD:411837
KH-I_Vigilin_rpt6 451..517 CDD:411804
KH-I_Vigilin_rpt7 522..588 CDD:411838
KH-I_Vigilin_rpt8 599..659 CDD:411839
KH-I_Vigilin_rpt9 668..737 CDD:411840
KH-I_Vigilin_rpt10 741..806 CDD:411841
KH-I_Vigilin_rpt11 817..882 CDD:411842
KH-I_Vigilin_rpt12 890..991 CDD:411843 6/18 (33%)
KH-I_Vigilin_rpt13 993..1070 CDD:411844 26/94 (28%)
KH-I_Vigilin_rpt14 1074..1144 CDD:411845 12/69 (17%)
KH-I_Vigilin_rpt15 1147..1214 CDD:411846 17/74 (23%)
bcc-1NP_502067.2 KH-I 14..97 CDD:469614 6/19 (32%)
KH-I_BICC1_rpt2 102..171 CDD:411849 21/68 (31%)
SAM 571..636 CDD:197735
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.