DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE8 and Gdap1

DIOPT Version :10

Sequence 1:NP_611330.2 Gene:GstE8 / 37113 FlyBaseID:FBgn0063492 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001101367.1 Gene:Gdap1 / 312890 RGDID:1309005 Length:358 Species:Rattus norvegicus


Alignment Length:241 Identity:48/241 - (19%)
Similarity:79/241 - (32%) Gaps:79/241 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KLILYGTEASPPVRAAKLTLAALGIPYEYVKINTLAKETLSPEFLRKNPQHTVPTLEDDGHFIWD 67
            :||||....|...:..:|.:|...:..|...::....|...|.|:|.|....||.|....:.|.:
  Rat    25 RLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICE 89

  Fly    68 SHAISAYLVSKY----------GQSDTLYP-----KDLLQRAVVDQRLHFESGVVF-----VNGL 112
            :..|..||...:          .:....||     ::||....:|...|   |.:.     |:.:
  Rat    90 ATQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTH---GCILHPELTVDSM 151

  Fly   113 RGITKPLFAT-------GQTT-----------------IPKER------------------YDAV 135
                .|.:||       |.|.                 |.|::                  .|.:
  Rat   152 ----IPAYATTRIRGQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDEL 212

  Fly   136 IEIYDFVETFLT----------GHDFIAGDQLTIADFSLITSITAL 171
            .::.|.|||.|.          ...::.|:..|:||.||..::..|
  Rat   213 EKVLDQVETELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE8NP_611330.2 GstA 4..209 CDD:440390 48/240 (20%)
Gdap1NP_001101367.1 GST_N_GDAP1 26..98 CDD:239350 19/71 (27%)
GST_C_GDAP1 179..289 CDD:198336 15/80 (19%)

Return to query results.
Submit another query.