DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE8 and Gdap1

DIOPT Version :9

Sequence 1:NP_001286571.1 Gene:GstE8 / 37113 FlyBaseID:FBgn0063492 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_034397.1 Gene:Gdap1 / 14545 MGIID:1338002 Length:358 Species:Mus musculus


Alignment Length:240 Identity:48/240 - (20%)
Similarity:78/240 - (32%) Gaps:79/240 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LILYGTEASPPVRAAKLTLAALGIPYEYVKINTLAKETLSPEFLRKNPQHTVPTLEDDGHFIWDS 68
            ||||....|...:..:|.:|...:..|...::....|...|.|:|.|....||.|....:.|.::
Mouse    26 LILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSAGEVPVLVHGENIICEA 90

  Fly    69 HAISAYLVSKY----------GQSDTLYP-----KDLLQRAVVDQRLHFESGVVF-----VNGLR 113
            ..|..||...:          .:....||     ::||....:|...|   |.:.     |:.: 
Mouse    91 TQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTH---GCILHPELTVDSM- 151

  Fly   114 GITKPLFAT-------GQTT-----------------IPKER------------------YDAVI 136
               .|.:||       |.|.                 |.|::                  .|.:.
Mouse   152 ---IPAYATTRIRSQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELE 213

  Fly   137 EIYDFVETFLT----------GHDFIAGDQLTIADFSLITSITAL 171
            ::.|.|||.|.          ...::.|:..|:||.||..::..|
Mouse   214 KVLDQVETELQRRNEETPEEGNQPWLCGESFTLADVSLAVTLHRL 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE8NP_001286571.1 GstA 4..196 CDD:223698 48/240 (20%)
GST_N_Delta_Epsilon 4..77 CDD:239343 20/72 (28%)
GST_C_Delta_Epsilon 91..209 CDD:198287 25/138 (18%)
Gdap1NP_034397.1 GST_N_GDAP1 26..98 CDD:239350 19/71 (27%)
GST_C_GDAP1 179..289 CDD:198336 15/80 (19%)
Required for mitochondrial localization. /evidence=ECO:0000250 320..358
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844845
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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