DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE6 and eEF1gamma

DIOPT Version :10

Sequence 1:NP_611328.1 Gene:GstE6 / 37111 FlyBaseID:FBgn0063494 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_652000.1 Gene:eEF1gamma / 44791 FlyBaseID:FBgn0029176 Length:431 Species:Drosophila melanogaster


Alignment Length:226 Identity:58/226 - (25%)
Similarity:97/226 - (42%) Gaps:34/226 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVKLTLYGLDPSPPVRAVKLTLAALNLTYEYVNVDIV-----ARAQLSPEYLEKNPQHTVPTLED 60
            |||.|||....:  .||.|..:||   .|....|.:.     .....|.|:|:|.|...||..|.
  Fly     1 MVKGTLYTYPEN--FRAYKALIAA---QYSGAQVKVADNFKFGETNKSAEFLKKFPGGKVPAFET 60

  Fly    61 -DGHYIWDSHAIIAYLVSKYADSDALYPKDPLKRAVVDQRLHFESGVVFANGIRSISK--SVLFQ 122
             :|.|:.:|:| ||||:   |:......|.|..:|.|.|.:.|....:.......:..  .:|.|
  Fly    61 AEGQYLSESNA-IAYLL---ANEQLRGGKCPFVQAQVQQWISFADNEIVPASCAWVFPLLGILPQ 121

  Fly   123 GQTKVPKERYDAIIEIYDFVETFLKGQD--YIAGNQLTIADFSLVSSVASLEAFVALDTTK--YP 183
            .:....|:..:|:::     :...|.||  ::||.::|:||..:.||:..|..:|...:.:  :.
  Fly   122 QKNSTAKQEAEAVLQ-----QLNQKLQDATFLAGERITLADIVVFSSLLHLYEYVLEPSVRSAFG 181

  Fly   184 RIGAWIKKLEQLPYYEEANGKGVRQLVAIFK 214
            .:..|...:        .|.|.|:.:|..:|
  Fly   182 NVNRWFVTI--------LNQKQVQAVVKDYK 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE6NP_611328.1 GstA 4..201 CDD:440390 50/208 (24%)
eEF1gammaNP_652000.1 GST_N_EF1Bgamma 4..79 CDD:239342 27/83 (33%)
GST_C_EF1Bgamma_like 90..209 CDD:198290 26/128 (20%)
EF1G 273..376 CDD:459888
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.