DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE5 and clic3

DIOPT Version :9

Sequence 1:NP_611327.1 Gene:GstE5 / 37110 FlyBaseID:FBgn0063495 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_955818.1 Gene:clic3 / 84040 ZFINID:ZDB-GENE-010507-2 Length:239 Species:Danio rerio


Alignment Length:176 Identity:35/176 - (19%)
Similarity:59/176 - (33%) Gaps:41/176 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VKLTLYGVNPSPPVRAVKLTLAALQLPYEFVNVNISGQEQLSEEYLKKN---PEHTVPTL---ED 60
            |..||..|:.......:|......|.|:...|..:.......||:|:..   |::  |.|   ..
Zfish    38 VNFTLTTVDMKRAPEVLKDLAPGSQPPFLIYNGEVRTDTNKIEEFLEDTLAPPQY--PKLCCRYK 100

  Fly    61 DGNYIWDS--HAIIAYLVSKYAD-SDALYPRDLLQRAVVDQRLHFETGVVFANGIKAITKPLFFN 122
            :.|...|.  |...||:.:.... :|.|..:.|.....:||.|                      
Zfish   101 ESNTAGDDIFHKFSAYIKNPNPGLNDMLEKKFLKSLMKLDQYL---------------------- 143

  Fly   123 GLNRIPKERYDAIVEIYDFVETFLAGHDYIAGDQLTIADFSLISSI 168
             |..:|.       |:....|...:...|:.|:.|::||.:|:..:
Zfish   144 -LTPLPH-------ELDQNPELSTSTRHYLDGNALSLADCNLLPKL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE5NP_611327.1 GstA 4..196 CDD:223698 34/174 (20%)
Thioredoxin_like 4..77 CDD:294274 18/80 (23%)
GST_C_Delta_Epsilon 91..209 CDD:198287 13/78 (17%)
clic3NP_955818.1 GST_N_CLIC 3..92 CDD:239359 12/53 (23%)
O-ClC 6..237 CDD:129941 35/176 (20%)
GST_C_CLIC3 99..231 CDD:198332 21/113 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589616
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.