DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE4 and Vars1

DIOPT Version :9

Sequence 1:NP_611326.1 Gene:GstE4 / 37109 FlyBaseID:FBgn0063496 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:66 Identity:16/66 - (24%)
Similarity:30/66 - (45%) Gaps:4/66 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VETFLDDHDFVAGDQLTIADFSIVSTITSIGVFLELDPAK---YPKIAAWLERLKELPYYEEANG 203
            :|.:|..|.::|||..|:||.:.|:.:. :.....|||:.   :..:..|.......|.:....|
  Rat   142 LEEWLRLHTYLAGDAPTLADLAAVTALL-LPFRYVLDPSARRIWGNVTRWFNTCVRQPEFRAVLG 205

  Fly   204 K 204
            :
  Rat   206 E 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE4NP_611326.1 GST_N_Delta_Epsilon 4..77 CDD:239343
GstA 6..196 CDD:223698 14/56 (25%)
GST_C_Delta_Epsilon 91..209 CDD:198287 16/66 (24%)
Vars1NP_445744.1 GstA <56..203 CDD:223698 15/61 (25%)
GST_C_family 92..213 CDD:295467 16/66 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296
PTZ00419 282..1264 CDD:240411
ValRS_core 335..938 CDD:185677
'HIGH' region 344..354
tRNA-synt_1_2 513..640 CDD:290334
'KMSKS' region 862..866
Anticodon_Ia_Val 938..1075 CDD:153416
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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