DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstE4 and Gdap1l1

DIOPT Version :9

Sequence 1:NP_611326.1 Gene:GstE4 / 37109 FlyBaseID:FBgn0063496 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_659140.2 Gene:Gdap1l1 / 228858 MGIID:2385163 Length:367 Species:Mus musculus


Alignment Length:176 Identity:36/176 - (20%)
Similarity:68/176 - (38%) Gaps:37/176 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NPQH-----------TVPLLQDDDACIWDSHAIMAYLVEKYAPSDELYPKDLLQRAKVD--QLMH 101
            :|||           .:|:......||.........::.|||.::   .:..|..|..|  :|.|
Mouse   136 SPQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAE---IRRHLANATTDLMKLDH 197

  Fly   102 FESGVIFE---SALRRLTRPVLFFGEPTLPRNQVDHILQVYDFVETFLDDHD----------FVA 153
            .|...:.|   |..::|...:|...:.:..:..:..:..|.|.:|..|:...          ::.
Mouse   198 EEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQTCELWLC 262

  Fly   154 GDQLTIADFSIVSTITSIGVFLELDPAKY------PKIAAWLERLK 193
            |...|:||..:.:|:..: .||.|. .||      |.:.::.||::
Mouse   263 GCAFTLADVLLGATLHRL-KFLGLS-KKYWEDGSRPNLQSFFERVQ 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE4NP_611326.1 GST_N_Delta_Epsilon 4..77 CDD:239343 6/37 (16%)
GstA 6..196 CDD:223698 36/176 (20%)
GST_C_Delta_Epsilon 91..209 CDD:198287 27/124 (22%)
Gdap1l1NP_659140.2 GstA 47..314 CDD:223698 36/176 (20%)
GST_N_GDAP1 47..119 CDD:239350
GST_C_family 201..311 CDD:295467 21/108 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844805
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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