DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE3 and vars1

DIOPT Version :10

Sequence 1:NP_611325.2 Gene:GstE3 / 37108 FlyBaseID:FBgn0063497 Length:220 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:172 Identity:44/172 - (25%)
Similarity:73/172 - (42%) Gaps:19/172 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PEFLKINP----LHTVPAL---DDNGFYLADSHAINSYLVSKYGRNDSLYPKDLKKRAIVDQRLH 101
            |..|..:|    ..:.|||   ...|..|:.:.|::.||.:...|..|    |.|:.:.|.|.|.
Zfish    29 PRILHQDPPAELARSRPALVLAGAGGTVLSGTSAVSWYLAATGKRAGS----DKKQESQVWQWLS 89

  Fly   102 YDSSVVTSTGRAITFPLFW----ENKTEIPQARIDALEGVYKSLNLFLENGNYLAGDNLTIADFH 162
            :..:.:|....|:.|||..    :.|.: ..:|.:.|. |.|:|:..|....:|.|:::|:||..
Zfish    90 FAENELTPVACAVAFPLLGIMGVDKKLQ-QSSRAELLR-VLKALDGTLALRTFLVGESVTLADAA 152

  Fly   163 V-IAGLTGF-FVFLPVDATKYPELAAWIKRIKELPYYEEANG 202
            | :|.|..| :...|.|......:..|.......|.:.:..|
Zfish   153 VAMAALLPFKYALEPADRKSLVNVTRWFNTCVNQPQFLKVLG 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstE3NP_611325.2 GstA 4..200 CDD:440390 43/168 (26%)
vars1NP_001298275.1 GST_C_ValRS_N 80..202 CDD:198327 29/117 (25%)
PTZ00419 291..1270 CDD:240411
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.