DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GstE2 and Gsto2

DIOPT Version :9

Sequence 1:NP_611324.1 Gene:GstE2 / 37107 FlyBaseID:FBgn0063498 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_001012071.1 Gene:Gsto2 / 309465 RGDID:1310764 Length:248 Species:Rattus norvegicus


Alignment Length:224 Identity:49/224 - (21%)
Similarity:93/224 - (41%) Gaps:58/224 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LYGMDISPPVRACKLTLRALNLDYEYKEMDLLAGDHFKDAFLKKNPQHTVPLLEDNGA-LIWDSH 70
            :|.|...|.....:|.|:|.::.:|...::|   .:..|.:..|:|...||:||::.. ||::| 
  Rat    26 IYSMRFCPYSHRTRLVLKAKSIRHEIININL---KNKPDWYYTKHPFGQVPVLENSQCQLIYES- 86

  Fly    71 AIVCYLVDKYANSDELYPRDLVLRAQVDQRLFFDASILFMSLRNVSIPYFL--------RQVSLV 127
            .|.|..:|......:|:|.|...||:  |::..:   ||..:..:|....:        ..:.:.
  Rat    87 VIACEYLDDVFPGRKLFPYDPYERAR--QKMLLE---LFCKVPQLSKECLVALRCGRDCTDLKVA 146

  Fly   128 PKEKVDNIKD--AYGHLENFLGDNPYLTGSQLTIADLCCGATASSLAAVLDLDELKYPKVAAWFE 190
            .::::.|:::  .|.:...|.||                        ::..:|.|.:|    |||
  Rat   147 LRQELCNLEEILEYQNTTFFGGD------------------------SISMIDYLVWP----WFE 183

  Fly   191 RLSKLPHYEEDNLRGLKKYINLLKPVLNL 219
            ||         ::.||...:| ..|:|.|
  Rat   184 RL---------DVYGLADCVN-HTPMLRL 202

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
GstE2NP_611324.1 GstA 5..196 CDD:223698 43/199 (22%)
GST_N_Delta_Epsilon 5..78 CDD:239343 20/71 (28%)
GST_C_Delta_Epsilon 94..209 CDD:198287 21/124 (17%)
Gsto2NP_001012071.1 GST_N_Omega 7..94 CDD:239353 20/71 (28%)